6U7E
HCoV-229E RBD Class III in complex with human APN
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Aminopeptidase N | polymer | 906 | 103522.0 | 2 | UniProt (P15144) Pfam (PF17900) Pfam (PF01433) Pfam (PF11838) | Homo sapiens (Human) | hAPN,Alanyl aminopeptidase,Aminopeptidase M,AP-M,Microsomal aminopeptidase,Myeloid plasma membrane glycoprotein CD13,gp150 |
| 2 | C, D (C, D) | Spike glycoprotein | polymer | 145 | 15665.0 | 2 | Pfam (PF01600) UniProt (by SIFTS) (Q1HVL8) | Human coronavirus 229E (HCoV-229E) | |
| 3 | E, H (E, H) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
| 4 | F, G (F, G) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 2 | In PDB GlyTouCan (G15407YE) | |||
| 5 | I, N (A, B) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 6 | J, K, L, M, O... (A, B, C, D) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 12 | Chemie (NAG) | |||
| 7 | W, X (A, B) | water | water | 18.0 | 5 | Chemie (HOH) |
Sequence modifications
A, B: 66 - 967 (UniProt: P15144)
| PDB | External Database | Details |
|---|---|---|
| Gly 62 | - | expression tag |
| Gly 63 | - | expression tag |
| Arg 64 | - | expression tag |
| Pro 65 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 238374.0 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 2021.9 | |
| Non-Polymers* | Number of molecules | 14 |
| Total formula weight | 2785.3 | |
| All* | Total formula weight | 243181.2 |
