6U0O
Crystal structure of a peptidoglycan release complex, SagB-SpdC, in lipidic cubic phase
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Lysostaphin resistance protein A | polymer | 278 | 31024.7 | 1 | UniProt (Q2YYX7) Pfam (PF02517) In PDB | Staphylococcus aureus (strain bovine RF122 / ET3-1) | |
2 | B | LYZ2 domain-containing protein | polymer | 297 | 34086.8 | 1 | UniProt (Q2FXF4) Pfam (PF01832) In PDB | Staphylococcus aureus (strain NCTC 8325) | |
3 | D | FLAG peptide | polymer | 8 | 1015.0 | 1 | Synthetic construct | ||
4 | A | CITRATE ANION | non-polymer | 189.1 | 1 | Chemie (FLC) | |||
5 | A | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 1 | Chemie (PG4) | |||
6 | A | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate | non-polymer | 356.5 | 1 | Chemie (OLC) | |||
7 | A, B | SULFATE ION | non-polymer | 96.1 | 3 | Chemie (SO4) | |||
8 | B | 2-(2-ETHOXYETHOXY)ETHANOL | non-polymer | 134.2 | 2 | Chemie (AE3) | |||
9 | water | water | 18.0 | 80 | Chemie (HOH) |
Sequence modifications
A: 1 - 256 (UniProt: Q2YYX7)
B: 1 - 284 (UniProt: Q2FXF4)
PDB | External Database | Details |
---|---|---|
Asp -21 | - | expression tag |
Tyr -20 | - | expression tag |
Lys -19 | - | expression tag |
Asp -18 | - | expression tag |
Asp -17 | - | expression tag |
Asp -16 | - | expression tag |
Asp -15 | - | expression tag |
Leu -14 | - | expression tag |
Glu -13 | - | expression tag |
Val -12 | - | expression tag |
Leu -11 | - | expression tag |
Phe -10 | - | expression tag |
Gln -9 | - | expression tag |
Gly -8 | - | expression tag |
Pro -7 | - | expression tag |
Gly -6 | - | expression tag |
Gly -5 | - | expression tag |
Ser -4 | - | expression tag |
Ser -3 | - | expression tag |
Thr -2 | - | expression tag |
Glu -1 | - | expression tag |
Tyr 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Lys 285 | - | expression tag |
Leu 286 | - | expression tag |
Ala 287 | - | expression tag |
Ala 288 | - | expression tag |
Ala 289 | - | expression tag |
Leu 290 | - | expression tag |
Glu 291 | - | expression tag |
His 292 | - | expression tag |
His 293 | - | expression tag |
His 294 | - | expression tag |
His 295 | - | expression tag |
His 296 | - | expression tag |
His 297 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 66126.5 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 1296.4 | |
All* | Total formula weight | 67422.9 |