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6TXE

Crystal structure of tetrameric human wt-SAMHD1 (residues 109-626) with GTP, dATP, dTMPNPP and Mg

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E...
(A, B, C, D, E...)
Deoxynucleoside triphosphate triphosphohydrolase SAMHD1polymer52060208.816UniProt (Q9Y3Z3)
Pfam (PF01966)
Homo sapiens (Human)dNTPase,Dendritic cell-derived IFNG-induced protein,DCIP,Monocyte protein 5,MOP-5,SAM domain and HD domain-containing protein 1,hSAMHD1
2AC, BD, EA, GB, HC...
(J, N, C, G, K...)
FE (III) IONnon-polymer55.816Chemie (FE)
3AB, BC, CC, CD, DD...
(F, J, N, C, G...)
MAGNESIUM IONnon-polymer24.332Chemie (MG)
4BB, DC, ED, HA, JB...
(F, J, N, C, G...)
5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidinenon-polymer481.216Chemie (1FZ)
5AA, CB, FD, KA, KB...
(B, F, N, D, G...)
GUANOSINE-5'-TRIPHOSPHATEnon-polymer523.216Chemie (GTP)
6AD, CA, DA, EB, FB...
(N, B, C, F, G...)
2'-DEOXYADENOSINE 5'-TRIPHOSPHATEnon-polymer491.216Chemie (DTP)
7BA, DB, EC, GD, IA...
(B, F, J, N, C...)
SULFATE IONnon-polymer96.111Chemie (SO4)
Sequence modifications
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P: 109 - 626 (UniProt: Q9Y3Z3)
PDBExternal DatabaseDetails
Gly 107-expression tag
Ser 108-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains16
Total formula weight963340.9
Non-Polymers*Number of molecules107
Total formula weight26656.7
All*Total formula weight989997.7
*Water molecules are not included.

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PDB entries from 2025-06-25

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