6TR3
Ruminococcus gnavus GH29 fucosidase E1_10125 in complex with fucose
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | F5/8 type C domain-containing protein | polymer | 552 | 61709.0 | 1 | UniProt (A0A2N5PIE7) Pfam (PF01120) Pfam (PF00754) UniProt (by SIFTS) (A0A6N3BKT0) | [Ruminococcus] gnavus E1 | |
| 2 | B (A) | beta-L-fucopyranose | non-polymer | 164.2 | 1 | Chemie (FUL) | |||
| 3 | C, D, E, F (A) | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
| 4 | G, H (A) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
| 5 | I (A) | water | water | 18.0 | 270 | Chemie (HOH) |
Sequence modifications
A: 17 - 568 (UniProt: A0A2N5PIE7)
| PDB | External Database | Details |
|---|---|---|
| Gly 17 | Arg 39 | conflict |
| Pro 18 | Ala 40 | conflict |
| Met 19 | Ala 41 | conflict |
| Asn 137 | Asp 159 | conflict |
| Glu 393 | Ala 415 | conflict |
| Ile 516 | Val 538 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 61709.0 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 341.5 | |
| All* | Total formula weight | 62050.5 |
