6TOP

Structure of the PorE C-terminal domain, a protein of T9SS from Porphyromonas gingivalis

Replaces:  6I9O

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (A)	OmpA family protein	polymer	154	17602.7	1	UniProt (T2NEY1)	Porphyromonas gingivalis JCVI SC001
2	B, C, D (B, C, D)	OmpA family protein	polymer	150	17050.1	3	UniProt (T2NEY1)	Porphyromonas gingivalis JCVI SC001
3	E, G, I, K (A, B, C, D)	GLCNAC(BETA1-4)-MURNAC(1,6-ANHYDRO)-L-ALA-GAMMA-D-GLU-MESO-A2PM-D-ALA	non-polymer		921.9	4	Chemie (MLD)
4	F, H, J, L (A, B, C, D)	SODIUM ION	non-polymer		23.0	4	Chemie (NA)
5	M, N, O, P (A, B, C, D)	water	water		18.0	754	Chemie (HOH)

Sequence modifications

A: 534 - 668 (UniProt: T2NEY1)

PDB	External Database	Details
His -19	-	expression tag
His -18	-	expression tag
His -17	-	expression tag
His -16	-	expression tag
Ser -15	-	expression tag
Ser -14	-	expression tag
Gly -13	-	expression tag
Val -12	-	expression tag
Asp -11	-	expression tag
Leu -10	-	expression tag
Gly -9	-	expression tag
Thr -8	-	expression tag
Glu -7	-	expression tag
Asn -6	-	expression tag
Leu -5	-	expression tag
Tyr -4	-	expression tag
Phe -3	-	expression tag
Gln -2	-	expression tag
Ser -1	-	expression tag

B, C, D: 534 - 668 (UniProt: T2NEY1)

PDB	External Database	Details
Ser -15	-	expression tag
Ser -14	-	expression tag
Gly -13	-	expression tag
Val -12	-	expression tag
Asp -11	-	expression tag
Leu -10	-	expression tag
Gly -9	-	expression tag
Thr -8	-	expression tag
Glu -7	-	expression tag
Asn -6	-	expression tag
Leu -5	-	expression tag
Tyr -4	-	expression tag
Phe -3	-	expression tag
Gln -2	-	expression tag
Ser -1	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	4
	Total formula weight	68752.9
Non-Polymers*	Number of molecules	8
	Total formula weight	3779.6
All*	Total formula weight	72532.4

*Water molecules are not included.