6TLK
Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylorubrum extorquens AM1 in an open conformation containing NADP+ and methylene-H4MPT
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Bifunctional protein MdtA | polymer | 303 | 31512.7 | 6 | UniProt (P55818) Pfam (PF09176) | Methylorubrum extorquens AM1 | |
| 2 | BA, G, K, M, R... (F, A, B, C, D...) | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | non-polymer | 743.4 | 6 | Chemie (NAP) | |||
| 3 | AA, GA, H, HA, I... (E, F, A, C, D) | FORMIC ACID | non-polymer | 46.0 | 13 | Chemie (FMT) | |||
| 4 | J, L (A, B) | 5,10-DIMETHYLENE TETRAHYDROMETHANOPTERIN | non-polymer | 788.7 | 2 | Chemie (H4M) | |||
| 5 | DA, EA, FA, N, O... (F, C, E) | GLYCEROL | non-polymer | 92.1 | 6 | Chemie (GOL) | |||
| 6 | T (D) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 7 | CA (F) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 8 | JA, KA, LA, MA, NA... (A, B, C, D, E...) | water | water | 18.0 | 2093 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 1 - 288 (UniProt: P55818)
| PDB | External Database | Details |
|---|---|---|
| Val 289 | - | expression tag |
| Asp 290 | - | expression tag |
| Lys 291 | - | expression tag |
| Leu 292 | - | expression tag |
| Ala 293 | - | expression tag |
| Ala 294 | - | expression tag |
| Ala 295 | - | expression tag |
| Leu 296 | - | expression tag |
| Glu 297 | - | expression tag |
| His 298 | - | expression tag |
| His 299 | - | expression tag |
| His 300 | - | expression tag |
| His 301 | - | expression tag |
| His 302 | - | expression tag |
| His 303 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 189076.4 | |
| Non-Polymers* | Number of molecules | 29 |
| Total formula weight | 7248.5 | |
| All* | Total formula weight | 196324.9 |






