6THE
Crystal structure of core domain of four-domain heme-cupredoxin-Cu nitrite reductase from Bradyrhizobium sp. ORS 375
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Copper-containing nitrite reductase | polymer | 321 | 34202.8 | 1 | UniProt (H0SHH5) Pfam (PF07732) | Bradyrhizobium sp. ORS 375 | |
| 2 | B, C (A) | COPPER (II) ION | non-polymer | 63.5 | 2 | Chemie (CU) | |||
| 3 | D, E, F (A) | YTTERBIUM (III) ION | non-polymer | 173.0 | 3 | Chemie (YB) | |||
| 4 | G, H, I, J (A) | ERBIUM (III) ION | non-polymer | 167.3 | 4 | Chemie (ER3) | |||
| 5 | K (A) | TERBIUM(III) ION | non-polymer | 158.9 | 1 | Chemie (TB) | |||
| 6 | L, M (A) | YTTRIUM (III) ION | non-polymer | 88.9 | 2 | Chemie (YT3) | |||
| 7 | N (A) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 8 | O, P, Q, R, S... (A) | pentane-1,5-diol | non-polymer | 104.1 | 7 | Chemie (9JE) | |||
| 9 | V (A) | water | water | 18.0 | 55 | Chemie (HOH) |
Sequence modifications
A: 2 - 315 (UniProt: H0SHH5)
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| Glu 316 | - | expression tag |
| Asn 317 | - | expression tag |
| Leu 318 | - | expression tag |
| Tyr 319 | - | expression tag |
| Phe 320 | - | expression tag |
| Gln 321 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 34202.8 | |
| Non-Polymers* | Number of molecules | 20 |
| Total formula weight | 2416.5 | |
| All* | Total formula weight | 36619.3 |
