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6TF3

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Cordycepin 5-triphosphate (3-dATP)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Chains: Apolymer5216785.11GenBank (94549081)Candidatus Koribacter versatilis Ellin345
2B, C, D, E
(A)
MAGNESIUM IONnon-polymer24.34Chemie (MG)
PubChem (888)
3F, G, H, I
(A)
SODIUM IONnon-polymer23.04Chemie (NA)
PubChem (923)
4J
(A)
3'-DEOXYADENOSINE-5'-TRIPHOSPHATEnon-polymer491.21Chemie (3AT)
PubChem (1601)
PubChem (65562)
PubChem (46936242)
PubChem (56991447)
PubChem (92436452)
PubChem (173772098)
PubChem (173979294)
5K
(A)
waterwater18.02Chemie (HOH)
Sequence modifications
A: 1 - 52 (GenBank: 94549081)
PDBExternal DatabaseDetails
A 29C 5127614conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight16785.1
Non-Polymers*Number of molecules9
Total formula weight680.4
All*Total formula weight17465.4
*Water molecules are not included.

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PDB entries from 2026-05-13

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