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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

6TDA

Structure of SWI/SNF chromatin remodeler RSC bound to a nucleosome

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, EHistone H3.2polymer13515303.92UniProt (P84233)
Pfam (PF00125)
In PDB		Xenopus laevis (African clawed frog)
2B, FHistone H4polymer10211263.22UniProt (P62799)
Pfam (PF15511)
In PDB		Xenopus laevis (African clawed frog)
3C, GHistone H2Apolymer12913978.22UniProt (Q6AZJ8)
Pfam (PF00125)
Pfam (PF16211)
UniProt (by SIFTS) (P06897)
In PDB		Xenopus laevis (African clawed frog)
4D, HHistone H2B 1.1polymer12213524.82UniProt (P02281)
Pfam (PF00125)
In PDB		Xenopus laevis (African clawed frog)H2B1.1
5IDNA-Ipolymer23772876.31synthetic construct
6JDNA-Jpolymer23773478.91synthetic construct
7KChromatin structure-remodeling complex subunit SFH1polymer42648833.21UniProt (Q06168)
Pfam (PF04855)
In PDB		Saccharomyces cerevisiae (strain ATCC 204508 / S288c)RSC complex subunit SFH1,SNF5 homolog 1
8LChromatin structure-remodeling complex protein RSC8polymer1114126489.91UniProt (P43609)
Pfam (PF16495)
Pfam (PF04433)
Pfam (PF00569)
Pfam (PF00249)
In PDB		Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Remodel the structure of chromatin complex subunit 8,SWI3 homolog
9MChromatin structure-remodeling complex subunit RSC7polymer43549716.51UniProt (P32832)
Pfam (PF08624)
In PDB		Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Nuclear protein localization protein 6,Remodel the structure of chromatin complex subunit 7
10NChromatin structure-remodeling complex subunit RSC9polymer58165289.31UniProt (Q03124)
In PDB		Saccharomyces cerevisiae (strain ATCC 204508 / S288c)RSC complex subunit RSC9,Remodel the structure of chromatin complex subunit 9
11OChromatin structure-remodeling complex protein RSC6polymer48354222.71UniProt (P25632)
In PDB		Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Remodel the structure of chromatin complex subunit 6
12PChromatin structure-remodeling complex protein RSC58polymer50257871.31UniProt (Q07979)
Pfam (PF00439)
In PDB		Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Remodel the structure of chromatin complex subunit 58
13QHigh temperature lethal protein 1polymer789192.51UniProt (Q9URQ5)
In PDB		Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Chromatin structure-remodeling complex protein HTL1
14RChromatin structure-remodeling complex subunit RSC4polymer62572372.41UniProt (Q02206)
Pfam (PF00439)
In PDB		Saccharomyces cerevisiae (strain ATCC 204508 / S288c)RSC complex subunit RSC4,Remodel the structure of chromatin complex subunit 4
15SNuclear protein STH1/NPS1polymer1359156982.41UniProt (P32597)
Pfam (PF07529)
Pfam (PF00176)
Pfam (PF00271)
Pfam (PF14619)
Pfam (PF00439)
In PDB		Saccharomyces cerevisiae (strain ATCC 204508 / S288c)ATP-dependent helicase STH1,Chromatin structure-remodeling complex protein STH1,SNF2 homolog
16TActin-related protein 7polymer47754613.31UniProt (Q12406)
Pfam (PF00022)
In PDB		Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Actin-like protein ARP7,Chromatin structure-remodeling complex protein ARP7,SWI/SNF complex component ARP7
17UActin-like protein ARP9polymer46753366.41UniProt (Q05123)
Pfam (PF00022)
In PDB		Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Chromatin structure-remodeling complex protein ARP9,SWI/SNF complex component ARP9
18VRegulator of Ty1 transposition protein 102polymer15718005.21UniProt (P53330)
Pfam (PF09510)
In PDB		Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
19XUnknown proteinpolymer38332613.11Saccharomyces cerevisiae S288C
20LZINC IONnon-polymer65.41Chemie (ZN)
Sequence modifications
A, E: 1 - 135 (UniProt: P84233)
PDBExternal DatabaseDetails
Ala 102Gly 103conflict
D, H: 1 - 122 (UniProt: P02281)
PDBExternal DatabaseDetails
Thr 29Ser 33conflict
T: 2 - 477 (UniProt: Q12406)
PDBExternal DatabaseDetails
Mse 1-initiating methionine
U: 2 - 467 (UniProt: Q05123)
PDBExternal DatabaseDetails
Mse 1-initiating methionine
V: 2 - 157 (UniProt: P53330)
PDBExternal DatabaseDetails
Mse 1-initiating methionine
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains23
Total formula weight1054063.7
Non-Polymers*Number of molecules1
Total formula weight65.4
All*Total formula weight1054129.1
*Water molecules are not included.

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PDB entries from 2024-04-24

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