6TCW
Crystal structure of Bacteroides thetaiotamicron EndoBT-3987 with Man5GlcNAc product
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Endo-beta-N-acetylglucosaminidase F1 | polymer | 451 | 49193.7 | 1 | UniProt (Q8A0N4) Pfam (PF08522) In PDB | Bacteroides thetaiotaomicron VPI-5482 | |
| 2 | B | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1031.9 | 1 | In PDB GlyTouCan (G28233ME) | |||
| 3 | A | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 4 | A | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
| 5 | water | water | 18.0 | 300 | Chemie (HOH) |
Sequence modifications
A: 27 - 476 (UniProt: Q8A0N4)
| PDB | External Database | Details |
|---|---|---|
| Gly 26 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 49193.7 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 1031.9 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 172.3 | |
| All* | Total formula weight | 50397.9 |
