6T8K
Crystal structure of Bacteroides thetaiotamicron EndoBT-3987 in complex with Man9GlcNAc product in P1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | Endo-beta-N-acetylglucosaminidase F1 | polymer | 451 | 49193.7 | 2 | UniProt (Q8A0N4) Pfam (PF08522) In PDB | Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) | |
| 2 | C, D | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1680.5 | 2 | In PDB GlyTouCan (G25577BM) | |||
| 3 | A, B | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
| 4 | water | water | 18.0 | 507 | Chemie (HOH) |
Sequence modifications
A, B: 27 - 476 (UniProt: Q8A0N4)
| PDB | External Database | Details |
|---|---|---|
| Gly 26 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 98387.5 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 3360.9 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 80.2 | |
| All* | Total formula weight | 101828.6 |
