6T57
Thrombin in Complex with a D-Phe-Pro-N-amidinopiperidine Derivative
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (L) | Prothrombin | polymer | 36 | 4096.5 | 1 | UniProt (P00734) Pfam (PF09396) | Homo sapiens (Human) | Coagulation factor II |
| 2 | B (H) | Prothrombin | polymer | 259 | 29780.2 | 1 | UniProt (P00734) Pfam (PF00089) | Homo sapiens (Human) | Coagulation factor II |
| 3 | C (I) | Hirudin variant-2 | polymer | 11 | 1491.5 | 1 | UniProt (P09945) | Hirudo medicinalis | |
| 4 | D (H) | DIMETHYL SULFOXIDE | non-polymer | 78.1 | 1 | Chemie (DMS) | |||
| 5 | E (H) | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
| 6 | F, G (H) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 7 | H (H) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 8 | I (H) | (2~{S})-1-[(2~{R})-2-azanyl-3-phenyl-propanoyl]-~{N}-[(1-carbamimidoylpiperidin-4-yl)methyl]pyrrolidine-2-carboxamide | non-polymer | 400.5 | 1 | Chemie (J3I) | |||
| 9 | J (H) | trifluoroacetic acid | non-polymer | 114.0 | 1 | Chemie (TFA) | |||
| 10 | K, L, M (L, H, I) | water | water | 18.0 | 155 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 35368.3 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 954.8 | |
| All* | Total formula weight | 36323.1 |
