6T3F
Crystal structure Nipah virus fusion glycoprotein in complex with a neutralising Fab fragment
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (F) | Fusion glycoprotein F0 | polymer | 502 | 55418.3 | 1 | UniProt (Q9IH63) Pfam (PF00523) | Nipah virus | Protein F |
| 2 | B (L) | Fab66 light chain | polymer | 216 | 22968.5 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 3 | C (H) | Fab66 heavy chain | polymer | 228 | 23992.0 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 4 | D (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 5 | E, F, G, H (F, H) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) |
Sequence modifications
F: 26 - 482 (UniProt: Q9IH63)
| PDB | External Database | Details |
|---|---|---|
| Glu 23 | - | expression tag |
| Thr 24 | - | expression tag |
| Gly 25 | - | expression tag |
| Gly 483 | - | expression tag |
| Thr 484 | - | expression tag |
| Met 485 | - | expression tag |
| Lys 486 | - | expression tag |
| Gln 487 | - | expression tag |
| Ile 488 | - | expression tag |
| Glu 489 | - | expression tag |
| Asp 490 | - | expression tag |
| Lys 491 | - | expression tag |
| Ile 492 | - | expression tag |
| Glu 493 | - | expression tag |
| Glu 494 | - | expression tag |
| Ile 495 | - | expression tag |
| Leu 496 | - | expression tag |
| Ser 497 | - | expression tag |
| Lys 498 | - | expression tag |
| Ile 499 | - | expression tag |
| Tyr 500 | - | expression tag |
| His 501 | - | expression tag |
| Ile 502 | - | expression tag |
| Glu 503 | - | expression tag |
| Asn 504 | - | expression tag |
| Glu 505 | - | expression tag |
| Ile 506 | - | expression tag |
| Ala 507 | - | expression tag |
| Arg 508 | - | expression tag |
| Ile 509 | - | expression tag |
| Lys 510 | - | expression tag |
| Lys 511 | - | expression tag |
| Leu 512 | - | expression tag |
| Ile 513 | - | expression tag |
| Gly 514 | - | expression tag |
| Glu 515 | - | expression tag |
| Gly 516 | - | expression tag |
| Gly 517 | - | expression tag |
| Ser 518 | - | expression tag |
| His 519 | - | expression tag |
| His 520 | - | expression tag |
| His 521 | - | expression tag |
| His 522 | - | expression tag |
| His 523 | - | expression tag |
| His 524 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 102378.8 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 424.4 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 884.8 | |
| All* | Total formula weight | 103688.0 |
