6T3F
Crystal structure Nipah virus fusion glycoprotein in complex with a neutralising Fab fragment
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | F | Fusion glycoprotein F0 | polymer | 502 | 55418.3 | 1 | UniProt (Q9IH63) Pfam (PF00523) In PDB | Nipah virus | Protein F |
2 | L | Fab66 light chain | polymer | 216 | 22968.5 | 1 | Oryctolagus cuniculus (rabbit) | ||
3 | H | Fab66 heavy chain | polymer | 228 | 23992.0 | 1 | Oryctolagus cuniculus (rabbit) | ||
4 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
5 | F, H | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) |
Sequence modifications
F: 26 - 482 (UniProt: Q9IH63)
PDB | External Database | Details |
---|---|---|
Glu 23 | - | expression tag |
Thr 24 | - | expression tag |
Gly 25 | - | expression tag |
Gly 483 | - | expression tag |
Thr 484 | - | expression tag |
Met 485 | - | expression tag |
Lys 486 | - | expression tag |
Gln 487 | - | expression tag |
Ile 488 | - | expression tag |
Glu 489 | - | expression tag |
Asp 490 | - | expression tag |
Lys 491 | - | expression tag |
Ile 492 | - | expression tag |
Glu 493 | - | expression tag |
Glu 494 | - | expression tag |
Ile 495 | - | expression tag |
Leu 496 | - | expression tag |
Ser 497 | - | expression tag |
Lys 498 | - | expression tag |
Ile 499 | - | expression tag |
Tyr 500 | - | expression tag |
His 501 | - | expression tag |
Ile 502 | - | expression tag |
Glu 503 | - | expression tag |
Asn 504 | - | expression tag |
Glu 505 | - | expression tag |
Ile 506 | - | expression tag |
Ala 507 | - | expression tag |
Arg 508 | - | expression tag |
Ile 509 | - | expression tag |
Lys 510 | - | expression tag |
Lys 511 | - | expression tag |
Leu 512 | - | expression tag |
Ile 513 | - | expression tag |
Gly 514 | - | expression tag |
Glu 515 | - | expression tag |
Gly 516 | - | expression tag |
Gly 517 | - | expression tag |
Ser 518 | - | expression tag |
His 519 | - | expression tag |
His 520 | - | expression tag |
His 521 | - | expression tag |
His 522 | - | expression tag |
His 523 | - | expression tag |
His 524 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 102378.8 | |
Branched | Number of molecules | 1 |
Total formula weight | 424.4 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 884.8 | |
All* | Total formula weight | 103688.0 |