6T08
Crystal structure of YTHDC1 with fragment 21 (DHU_DC1_131)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | YTHDC1 | polymer | 183 | 20967.2 | 2 | UniProt (Q96MU7) Pfam (PF04146) | Homo sapiens (Human) | |
| 2 | C, F (A, B) | ~{N}-(1~{H}-imidazol-2-yl)thiophene-2-sulfonamide | non-polymer | 229.3 | 2 | Chemie (M5B) | |||
| 3 | D, E, G, H (A, B) | SULFATE ION | non-polymer | 96.1 | 4 | Chemie (SO4) | |||
| 4 | I, J (A, B) | water | water | 18.0 | 500 | Chemie (HOH) |
Sequence modifications
A, B: 345 - 509 (UniProt: Q96MU7)
| PDB | External Database | Details |
|---|---|---|
| Met 327 | - | initiating methionine |
| His 328 | - | expression tag |
| His 329 | - | expression tag |
| His 330 | - | expression tag |
| His 331 | - | expression tag |
| His 332 | - | expression tag |
| His 333 | - | expression tag |
| Ser 334 | - | expression tag |
| Ser 335 | - | expression tag |
| Gly 336 | - | expression tag |
| Arg 337 | - | expression tag |
| Glu 338 | - | expression tag |
| Asn 339 | - | expression tag |
| Leu 340 | - | expression tag |
| Tyr 341 | - | expression tag |
| Phe 342 | - | expression tag |
| Gln 343 | - | expression tag |
| Gly 344 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 41934.3 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 842.8 | |
| All* | Total formula weight | 42777.1 |






