6SYX
Hydrogenase-2 variant R479K - reduced sample exposed to pure oxygen
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (SSS, TTT) | Hydrogenase-2 small chain | polymer | 298 | 32371.5 | 2 | UniProt (P69741) Pfam (PF01058) Pfam (PF14720) | Escherichia coli K-12 | HYD2,Membrane-bound hydrogenase 2 small subunit,NiFe hydrogenase |
| 2 | B, D (LLL, MMM) | Hydrogenase-2 large chain | polymer | 567 | 62529.9 | 2 | UniProt (V0V766) | Escherichia coli 908519 | |
| 3 | E, G, S, U (SSS, TTT) | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 4 | Chemie (SF4) | |||
| 4 | F, T (SSS, TTT) | FE3-S4 CLUSTER | non-polymer | 295.8 | 2 | Chemie (F3S) | |||
| 5 | AA, H, I, J, N... (MMM, SSS, LLL, TTT) | GLYCEROL | non-polymer | 92.1 | 7 | Chemie (GOL) | |||
| 6 | K, X (LLL, MMM) | CARBONMONOXIDE-(DICYANO) IRON | non-polymer | 135.9 | 2 | Chemie (FCO) | |||
| 7 | L, Y (LLL, MMM) | NICKEL (II) ION | non-polymer | 58.7 | 2 | Chemie (NI) | |||
| 8 | M, O, V, Z (LLL, TTT, MMM) | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
| 9 | BA, P (MMM, LLL) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 10 | CA, Q (MMM, LLL) | OXYGEN MOLECULE | non-polymer | 32.0 | 2 | Chemie (OXY) | |||
| 11 | DA, EA, FA, GA (SSS, LLL, TTT, MMM) | water | water | 18.0 | 1809 | Chemie (HOH) |
Sequence modifications
SSS, TTT: -1 - 290 (UniProt: P69741)
LLL, MMM: 1 - 567 (UniProt: V0V766)
| PDB | External Database | Details |
|---|---|---|
| His 291 | - | expression tag |
| His 292 | - | expression tag |
| His 293 | - | expression tag |
| His 294 | - | expression tag |
| His 295 | - | expression tag |
| His 296 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Lys 479 | Arg 479 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 189802.8 | |
| Non-Polymers* | Number of molecules | 25 |
| Total formula weight | 3264.1 | |
| All* | Total formula weight | 193066.9 |






