6SPG
Pseudomonas aeruginosa 70s ribosome from a clinical isolate
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (a) | 16S ribosomal RNA | polymer | 1526 | 494643.9 | 1 | GenBank (1353913695) | Pseudomonas aeruginosa | |
| 2 | B (b) | 30S ribosomal protein S2 | polymer | 239 | 26684.8 | 1 | UniProt (A0A072ZPV8) Pfam (PF00318) | Pseudomonas aeruginosa | |
| 3 | C (c) | 30S ribosomal protein S3 | polymer | 205 | 23438.2 | 1 | UniProt (A0A140S919) Pfam (PF07650) Pfam (PF00189) | Pseudomonas aeruginosa | |
| 4 | D (d) | 30S ribosomal protein S4 | polymer | 205 | 23187.5 | 1 | UniProt (A0A072ZDF7) Pfam (PF00163) Pfam (PF01479) | Pseudomonas aeruginosa | |
| 5 | E (e) | 30S ribosomal protein S5 | polymer | 156 | 16432.1 | 1 | UniProt (A0A241XG65) Pfam (PF00333) Pfam (PF03719) | Pseudomonas aeruginosa | |
| 6 | F (f) | 30S ribosomal protein S6 | polymer | 105 | 12278.8 | 1 | UniProt (A0A069Q263) Pfam (PF01250) | Pseudomonas aeruginosa | |
| 7 | G (g) | 30S ribosomal protein S7 | polymer | 154 | 17313.2 | 1 | UniProt (A0A2V3F2U6) Pfam (PF00177) | Pseudomonas aeruginosa | |
| 8 | H (h) | 30S ribosomal protein S8 | polymer | 129 | 14059.4 | 1 | UniProt (E2RXT9) Pfam (PF00410) | Pseudomonas aeruginosa | |
| 9 | I (i) | 30S ribosomal protein S9 | polymer | 126 | 14139.2 | 1 | UniProt (A0A069PXX1) Pfam (PF00380) | Pseudomonas aeruginosa | |
| 10 | J (j) | 30S ribosomal protein S10 | polymer | 96 | 10886.6 | 1 | UniProt (E2RXT0) Pfam (PF00338) | Pseudomonas aeruginosa | |
| 11 | K (k) | 30S ribosomal protein S11 | polymer | 115 | 12086.7 | 1 | UniProt (E2RXU4) Pfam (PF00411) | Pseudomonas aeruginosa | |
| 12 | L (l) | 30S ribosomal protein S12 | polymer | 121 | 13569.7 | 1 | UniProt (A0A071L394) Pfam (PF00164) | Pseudomonas aeruginosa | |
| 13 | M (m) | 30S ribosomal protein S13 | polymer | 110 | 12307.2 | 1 | UniProt (E2RXU3) Pfam (PF00416) | Pseudomonas aeruginosa | |
| 14 | N (n) | 30S ribosomal protein S14 | polymer | 98 | 11203.0 | 1 | UniProt (E2RXT8) Pfam (PF00253) | Pseudomonas aeruginosa | |
| 15 | O (o) | 30S ribosomal protein S15 | polymer | 86 | 9776.2 | 1 | UniProt (A0A071L3R7) Pfam (PF00312) | Pseudomonas aeruginosa | |
| 16 | P (p) | 30S ribosomal protein S16 | polymer | 78 | 8762.9 | 1 | UniProt (A0A2V4FRZ2) Pfam (PF00886) | Pseudomonas aeruginosa | |
| 17 | Q (q) | 30S ribosomal protein S17 | polymer | 76 | 8848.4 | 1 | UniProt (E2RXT5) Pfam (PF00366) | Pseudomonas aeruginosa | |
| 18 | R (r) | 30S ribosomal protein S18 | polymer | 71 | 8346.7 | 1 | UniProt (A0A2V3DLV3) Pfam (PF01084) | Pseudomonas aeruginosa | |
| 19 | S (s) | 30S ribosomal protein S19 | polymer | 80 | 9182.9 | 1 | UniProt (E2RXT2) Pfam (PF00203) | Pseudomonas aeruginosa | |
| 20 | T (t) | 30S ribosomal protein S20 | polymer | 85 | 9426.1 | 1 | UniProt (A0A072ZDZ9) Pfam (PF01649) | Pseudomonas aeruginosa | |
| 21 | U (u) | 30S ribosomal protein S21 | polymer | 63 | 7519.8 | 1 | UniProt (A0A069QC99) Pfam (PF01165) | Pseudomonas aeruginosa | |
| 22 | V (A) | 23S ribosomal RNA | polymer | 2888 | 935990.4 | 1 | GenBank (470469287) | Pseudomonas aeruginosa | |
| 23 | W (B) | 5S ribosomal RNA | polymer | 117 | 37679.4 | 1 | GenBank (1384417243) | Pseudomonas aeruginosa | |
| 24 | X (C) | 50S ribosomal protein L2 | polymer | 271 | 29439.0 | 1 | UniProt (A0A241XHA2) Pfam (PF00181) Pfam (PF03947) | Pseudomonas aeruginosa | |
| 25 | Y (D) | 50S ribosomal protein L3 | polymer | 207 | 22179.2 | 1 | UniProt (A0A072ZBZ2) Pfam (PF00297) | Pseudomonas aeruginosa | |
| 26 | Z (E) | 50S ribosomal protein L4 | polymer | 199 | 21542.7 | 1 | UniProt (A0A241XH26) Pfam (PF00573) | Pseudomonas aeruginosa | |
| 27 | AA (F) | 50S ribosomal protein L5 | polymer | 174 | 19804.1 | 1 | UniProt (A0A072ZMU2) Pfam (PF00281) Pfam (PF00673) | Pseudomonas aeruginosa | |
| 28 | BA (G) | 50S ribosomal protein L6 | polymer | 173 | 18610.4 | 1 | UniProt (A0A2V3F3S9) Pfam (PF00347) | Pseudomonas aeruginosa | |
| 29 | CA (H) | 50S ribosomal protein L9 | polymer | 78 | 8216.4 | 1 | UniProt (A0A072ZKF0) Pfam (PF01281) | Pseudomonas aeruginosa | |
| 30 | DA (I) | 50S ribosomal protein L11 | polymer | 140 | 14623.7 | 1 | UniProt (A0A2V3GYK0) Pfam (PF03946) Pfam (PF00298) | Pseudomonas aeruginosa | |
| 31 | EA (J) | 50S ribosomal protein L13 | polymer | 141 | 15927.4 | 1 | UniProt (A0A071L356) Pfam (PF00572) | Pseudomonas aeruginosa | |
| 32 | FA (K) | 50S ribosomal protein L14 | polymer | 120 | 13223.6 | 1 | UniProt (E2RXT6) Pfam (PF00238) | Pseudomonas aeruginosa | |
| 33 | GA (L) | 50S ribosomal protein L15 | polymer | 143 | 15073.3 | 1 | UniProt (A0A2V3D5Z8) Pfam (PF00828) | Pseudomonas aeruginosa | |
| 34 | HA (M) | 50S ribosomal protein L16 | polymer | 135 | 15203.9 | 1 | UniProt (A0A069QEB6) Pfam (PF00252) | Pseudomonas aeruginosa | |
| 35 | IA (N) | 50S ribosomal protein L17 | polymer | 118 | 13495.8 | 1 | UniProt (A0A072ZCA1) Pfam (PF01196) | Pseudomonas aeruginosa | |
| 36 | JA (O) | 50S ribosomal protein L18 | polymer | 115 | 12556.5 | 1 | UniProt (E2RXU0) Pfam (PF00861) | Pseudomonas aeruginosa | |
| 37 | KA (P) | 50S ribosomal protein L19 | polymer | 113 | 12708.8 | 1 | UniProt (A0A263PZC6) Pfam (PF01245) | Pseudomonas aeruginosa | |
| 38 | LA (Q) | 50S ribosomal protein L20 | polymer | 117 | 13266.8 | 1 | UniProt (A0A069QEE3) Pfam (PF00453) | Pseudomonas aeruginosa | |
| 39 | MA (R) | 50S ribosomal protein L21 | polymer | 102 | 11607.5 | 1 | UniProt (A0A072ZDZ0) Pfam (PF00829) | Pseudomonas aeruginosa | |
| 40 | NA (S) | 50S ribosomal protein L22 | polymer | 109 | 11804.8 | 1 | UniProt (A0A1C7BCP0) | Pseudomonas aeruginosa | |
| 41 | OA (T) | 50S ribosomal protein L23 | polymer | 92 | 10231.9 | 1 | UniProt (E2RXT1) Pfam (PF00276) | Pseudomonas aeruginosa | |
| 42 | PA (U) | 50S ribosomal protein L24 | polymer | 103 | 11423.4 | 1 | UniProt (E2RXT7) Pfam (PF00467) Pfam (PF17136) | Pseudomonas aeruginosa | |
| 43 | QA (V) | 50S ribosomal protein L25 | polymer | 188 | 20346.5 | 1 | UniProt (A0A072ZBM5) Pfam (PF01386) Pfam (PF14693) | Pseudomonas aeruginosa | General stress protein CTC |
| 44 | RA (W) | 50S ribosomal protein L27 | polymer | 76 | 8124.4 | 1 | UniProt (A0A071LFT4) Pfam (PF01016) | Pseudomonas aeruginosa | |
| 45 | SA (X) | 50S ribosomal protein L28 | polymer | 77 | 8956.4 | 1 | UniProt (A0A072ZIQ9) Pfam (PF00830) | Pseudomonas aeruginosa | |
| 46 | TA (Y) | Ribosomal protein uL29 | polymer | 60 | 6807.8 | 1 | Pseudomonas aeruginosa | ||
| 47 | UA (Z) | 50S ribosomal protein L30 | polymer | 57 | 6358.4 | 1 | UniProt (E2RXU1) Pfam (PF00327) | Pseudomonas aeruginosa | |
| 48 | VA (1) | 50S ribosomal protein L31 | polymer | 31 | 3368.9 | 1 | UniProt (A0A072ZJG4) Pfam (PF01197) | Pseudomonas aeruginosa | |
| 49 | WA (2) | 50S ribosomal protein L32 | polymer | 53 | 6043.8 | 1 | UniProt (A0A069QB25) Pfam (PF01783) | Pseudomonas aeruginosa | |
| 50 | XA (3) | 50S ribosomal protein L33 | polymer | 50 | 5928.9 | 1 | UniProt (A0A140SG33) Pfam (PF00471) | Pseudomonas aeruginosa | |
| 51 | YA (4) | 50S ribosomal protein L34 | polymer | 44 | 5226.3 | 1 | UniProt (A0A087L9L7) Pfam (PF00468) | Pseudomonas aeruginosa | |
| 52 | ZA (5) | 50S ribosomal protein L35 | polymer | 63 | 7256.8 | 1 | UniProt (A0A069QC44) Pfam (PF01632) | Pseudomonas aeruginosa | |
| 53 | AB (6) | 50S ribosomal protein L36 | polymer | 38 | 4447.4 | 1 | UniProt (E2RXU2) Pfam (PF00444) | Pseudomonas aeruginosa | |
| 54 | AC, AD, AE, AF, AG... (A, a, B, D, P) | MAGNESIUM ION | non-polymer | 24.3 | 172 | Chemie (MG) |
Sequence modifications
a: 2 - 1527 (GenBank: 1353913695)
r: 4 - 74 (UniProt: A0A2V3DLV3)
u: 4 - 67 (UniProt: A0A069QC99)
A: 2 - 2889 (GenBank: 470469287)
F: 3 - 176 (UniProt: A0A072ZMU2)
V: 4 - 191 (UniProt: A0A072ZBM5)
W: 10 - 85 (UniProt: A0A071LFT4)
| PDB | External Database | Details |
|---|---|---|
| A 72 | G 891104 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Arg 9 | Lys 9 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Ala 28 | Val 28 | conflict |
| PDB | External Database | Details |
|---|---|---|
| A 361 | G 361 | conflict |
| G 2872 | U 2872 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Leu 7 | Ile 7 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Val 6 | Leu 6 | conflict |
| Val 71 | Ala 71 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Leu 40 | Gln 40 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 53 |
| Total formula weight | 2111568.0 | |
| Non-Polymers* | Number of molecules | 172 |
| Total formula weight | 4180.5 | |
| All* | Total formula weight | 2115748.4 |
