6SPB
Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 23S ribosomal RNA | polymer | 2888 | 935990.4 | 1 | REF (470469287) | Pseudomonas aeruginosa | |
| 2 | B (B) | 5S rRNA | polymer | 117 | 37679.4 | 1 | GenBank (1384417243) | Pseudomonas aeruginosa | |
| 3 | C (C) | 50S ribosomal protein L2 | polymer | 271 | 29439.0 | 1 | UniProt (A0A241XHA2) Pfam (PF00181) Pfam (PF03947) | Pseudomonas aeruginosa | |
| 4 | D (D) | 50S ribosomal protein L3 | polymer | 207 | 22179.2 | 1 | UniProt (A0A072ZBZ2) Pfam (PF00297) | Pseudomonas aeruginosa | |
| 5 | E (E) | 50S ribosomal protein L4 | polymer | 199 | 21542.7 | 1 | UniProt (A0A241XH26) Pfam (PF00573) | Pseudomonas aeruginosa | |
| 6 | F (F) | 50S ribosomal protein L5 | polymer | 174 | 19659.9 | 1 | UniProt (A0A072ZMU2) Pfam (PF00281) Pfam (PF00673) | Pseudomonas aeruginosa | |
| 7 | G (G) | 50S ribosomal protein L6 | polymer | 169 | 18189.9 | 1 | UniProt (A0A2V3F3S9) Pfam (PF00347) | Pseudomonas aeruginosa | |
| 8 | H (H) | 50S ribosomal protein L9 | polymer | 78 | 8216.4 | 1 | UniProt (A0A072ZKF0) Pfam (PF01281) | Pseudomonas aeruginosa | |
| 9 | I (I) | 50S ribosomal protein L11 | polymer | 140 | 14623.7 | 1 | UniProt (A0A2V3GYK0) Pfam (PF03946) Pfam (PF00298) | Pseudomonas aeruginosa | |
| 10 | J (J) | 50S ribosomal protein L13 | polymer | 141 | 15927.4 | 1 | UniProt (A0A071L356) Pfam (PF00572) | Pseudomonas aeruginosa | |
| 11 | K (K) | 50S ribosomal protein L14 | polymer | 120 | 13223.6 | 1 | UniProt (E2RXT6) Pfam (PF00238) | Pseudomonas aeruginosa | |
| 12 | L (L) | 50S ribosomal protein L15 | polymer | 144 | 15204.5 | 1 | UniProt (A0A2V3D5Z8) Pfam (PF00828) | Pseudomonas aeruginosa | |
| 13 | M (M) | 50S ribosomal protein L16 | polymer | 136 | 15303.0 | 1 | UniProt (A0A069QEB6) Pfam (PF00252) | Pseudomonas aeruginosa | |
| 14 | N (N) | 50S ribosomal protein L17 | polymer | 120 | 13692.0 | 1 | UniProt (A0A072ZCA1) Pfam (PF01196) | Pseudomonas aeruginosa | |
| 15 | O (O) | 50S ribosomal protein L18 | polymer | 115 | 12556.5 | 1 | UniProt (E2RXU0) Pfam (PF00861) | Pseudomonas aeruginosa | |
| 16 | P (P) | 50S ribosomal protein L19 | polymer | 115 | 12924.0 | 1 | UniProt (A0A263PZC6) Pfam (PF01245) | Pseudomonas aeruginosa | |
| 17 | Q (Q) | 50S ribosomal protein L20 | polymer | 117 | 13266.8 | 1 | UniProt (A0A069QEE3) Pfam (PF00453) | Pseudomonas aeruginosa | |
| 18 | R (R) | 50S ribosomal protein L21 | polymer | 102 | 11607.5 | 1 | UniProt (A0A072ZDZ0) Pfam (PF00829) | Pseudomonas aeruginosa | |
| 19 | S (S) | 50S ribosomal protein L22 | polymer | 110 | 11936.0 | 1 | UniProt (A0A1C7BCP0) | Pseudomonas aeruginosa | |
| 20 | T (T) | 50S ribosomal protein L23 | polymer | 94 | 10410.2 | 1 | UniProt (E2RXT1) Pfam (PF00276) | Pseudomonas aeruginosa | |
| 21 | U (U) | 50S ribosomal protein L24 | polymer | 103 | 11423.4 | 1 | UniProt (E2RXT7) Pfam (PF00467) Pfam (PF17136) | Pseudomonas aeruginosa | |
| 22 | V (V) | 50S ribosomal protein L25 | polymer | 188 | 20346.5 | 1 | UniProt (A0A072ZBM5) Pfam (PF01386) Pfam (PF14693) | Pseudomonas aeruginosa | General stress protein CTC |
| 23 | W (W) | 50S ribosomal protein L27 | polymer | 76 | 8124.4 | 1 | UniProt (A0A071LFT4) Pfam (PF01016) | Pseudomonas aeruginosa | |
| 24 | X (X) | 50S ribosomal protein L28 | polymer | 77 | 8956.4 | 1 | UniProt (A0A072ZIQ9) Pfam (PF00830) | Pseudomonas aeruginosa | |
| 25 | Y (Y) | 50S ribosomal protein L29 | polymer | 60 | 6807.8 | 1 | UniProt (W6V2V8) Pfam (PF00831) | Pseudomonas aeruginosa | |
| 26 | Z (Z) | 50S ribosomal protein L30 | polymer | 57 | 6358.4 | 1 | UniProt (E2RXU1) Pfam (PF00327) | Pseudomonas aeruginosa | |
| 27 | AA (1) | 50S ribosomal protein L31 | polymer | 31 | 3368.9 | 1 | UniProt (A0A072ZJG4) Pfam (PF01197) | Pseudomonas aeruginosa | |
| 28 | BA (2) | 50S ribosomal protein L32 | polymer | 53 | 6043.8 | 1 | UniProt (A0A069QB25) Pfam (PF01783) | Pseudomonas aeruginosa | |
| 29 | CA (3) | 50S ribosomal protein L33 | polymer | 50 | 5928.9 | 1 | UniProt (A0A140SG33) Pfam (PF00471) | Pseudomonas aeruginosa | |
| 30 | DA (4) | 50S ribosomal protein L34 | polymer | 44 | 5226.3 | 1 | UniProt (A0A087L9L7) Pfam (PF00468) | Pseudomonas aeruginosa | |
| 31 | EA (5) | 50S ribosomal protein L35 | polymer | 63 | 7256.8 | 1 | UniProt (A0A069QC44) Pfam (PF01632) | Pseudomonas aeruginosa | |
| 32 | FA (6) | 50S ribosomal protein L36 | polymer | 38 | 4447.4 | 1 | UniProt (E2RXU2) Pfam (PF00444) | Pseudomonas aeruginosa |
Sequence modifications
A: 2 - 2889 (REF: 470469287)
F: 3 - 176 (UniProt: A0A072ZMU2)
G: 2 - 170 (UniProt: A0A2V3F3S9)
T: 1 - 94 (UniProt: E2RXT1)
V: 4 - 191 (UniProt: A0A072ZBM5)
W: 10 - 85 (UniProt: A0A071LFT4)
Y: 1 - 60 (UniProt: W6V2V8)
| PDB | External Database | Details |
|---|---|---|
| A 361 | G 361 | conflict |
| G 2872 | U 2872 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Leu 7 | Ile 7 | conflict |
| Ala 80 | Arg 80 | conflict |
| Ala 81 | Glu 81 | conflict |
| PDB | External Database | Details |
|---|---|---|
| - | Gly 93 | deletion |
| - | Tyr 94 | deletion |
| - | Lys 95 | deletion |
| - | Ala 96 | deletion |
| PDB | External Database | Details |
|---|---|---|
| Ala 2 | Asn 2 | conflict |
| Ala 3 | Gln 3 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Val 6 | Leu 6 | conflict |
| Val 71 | Ala 71 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Leu 40 | Gln 40 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Glu 8 | - | insertion |
| Gly 11 | Ala 11 | conflict |
| Pro 12 | Gln 12 | conflict |
| Val 13 | Gln 13 | conflict |
| Thr 14 | Leu 14 | conflict |
| Gly 15 | Asn 15 | conflict |
| Asn 16 | Glu 16 | conflict |
| Asn 17 | Gln 17 | conflict |
| Ile 18 | Leu 18 | conflict |
| Ser 19 | Leu 19 | conflict |
| His 20 | Gly 20 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 32 |
| Total formula weight | 1347861.5 | |
| All* | Total formula weight | 1347861.5 |
