6SMQ
Structure of the RagAB peptide importer in the 'open-closed' state
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D (A, D) | Lipoprotein RagB | polymer | 482 | 54430.9 | 2 | UniProt (F5H948) Pfam (PF14322) Pfam (PF07980) | Porphyromonas gingivalis (strain ATCC BAA-308 / W83) | |
| 2 | B (B) | RagA protein | polymer | 903 | 100351.0 | 1 | UniProt (Q7MXJ7) Pfam (PF07715) Pfam (PF00593) | Porphyromonas gingivalis (strain ATCC BAA-308 / W83) | |
| 3 | C (C) | SER-GLY-ALA-THR-THR-ALA-THR-THR-THR-THR-SER-ASN-SER | polymer | 13 | 1199.2 | 1 | Porphyromonas gingivalis W83 | ||
| 4 | E (E) | RagA protein | polymer | 915 | 101582.4 | 1 | UniProt (Q7MXJ7) Pfam (PF07715) Pfam (PF00593) | Porphyromonas gingivalis (strain ATCC BAA-308 / W83) | |
| 5 | F, K (A, D) | (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15-METHYLHEXADECANOYL)OXY]METHYL}-4-OXIDO-7-OXO-3,5-DIOXA-8-AZA-4-PHOSPHAHEPTACOS-1-YL 15-METHYLHEXADECANOATE | non-polymer | 1233.7 | 2 | Chemie (5PL) | |||
| 6 | G, L (A, D) | PALMITIC ACID | non-polymer | 256.4 | 2 | Chemie (PLM) | |||
| 7 | H, I, J, M, N (B, E) | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | non-polymer | 306.4 | 5 | Chemie (C8E) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 311994.3 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 4512.5 | |
| All* | Total formula weight | 316506.8 |
