Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6SH8

Cryo-EM structure of the Type III-B Cmr-beta bound to cognate target RNA and AMPPnP, state 2, in the presence of ssDNA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, CCRISPR-associated protein, Cmr5 familypolymer15517961.83UniProt (F0NDX5)
In PDB
Sulfolobus islandicus REY15A
2D, E, F, GCRISPR-associated RAMP protein, Cmr4 familypolymer28632322.44UniProt (F0NDX6)
Pfam (PF03787)
In PDB
Sulfolobus islandicus REY15A
3HCRISPR-associated protein, Cmr3 familypolymer31336008.51UniProt (F0NDX1)
Pfam (PF09700)
In PDB
Sulfolobus islandicus REY15A
4ICRISPR-associated RAMP protein, Cmr6 familypolymer29633945.91UniProt (F0NDX3)
Pfam (PF03787)
In PDB
Sulfolobus islandicus REY15A
5JCmr1,CRISPR-associated RAMP protein, Cmr1 familypolymer47655389.01UniProt (F0NDX4)
Pfam (PF03787)
In PDB
Sulfolobus islandicus REY15A
6KCRISPR-associated protein, Cmr2 familypolymer1037120856.51UniProt (F0NDX2)
Pfam (PF12469)
In PDB
Sulfolobus islandicus REY15A
7L, M, N, O, P...CRISPR-associated protein Cmrxpolymer17419705.626UniProt (F0NDX7)
Pfam (PF19021)
In PDB
Sulfolobus islandicus REY15A
8UCognate target RNApolymer4614704.71synthetic construct
9VcrRNApolymer5116409.91GenBank (323473489)Sulfolobus islandicus REY15A
10KZINC IONnon-polymer65.41Chemie (ZN)
11KPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTERnon-polymer506.22Chemie (ANP)
12KMANGANESE (II) IONnon-polymer54.93Chemie (MN)
Sequence modifications
D, E, F, G: 1 - 286 (UniProt: F0NDX6)
PDBExternal DatabaseDetails
Ala 31Asp 31engineered mutation
I: 1 - 283 (UniProt: F0NDX3)
PDBExternal DatabaseDetails
Ala 284-expression tag
Ala 285-expression tag
Ala 286-expression tag
His 287-expression tag
His 288-expression tag
His 289-expression tag
His 290-expression tag
His 291-expression tag
His 292-expression tag
His 293-expression tag
His 294-expression tag
His 295-expression tag
His 296-expression tag
J: 1 - 5 (PDB: 6SH8)
J: 6 - 476 (UniProt: F0NDX4)
V: 1 - 51 (GenBank: 323473489)
PDBExternal DatabaseDetails
A 1C 2068518conflict
U 3G 2068520conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains39
Total formula weight972835.2
Non-Polymers*Number of molecules6
Total formula weight1242.6
All*Total formula weight974077.8
*Water molecules are not included.

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon