6SA1
Post catalytic complex of Prim-PolC from Mycobacterium smegmatis with gapped DNA and 3'-dUTP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, E (A, D) | DNA polymerase LigD, polymerase domain | polymer | 350 | 39416.5 | 2 | UniProt (A0R5T1) Pfam (PF21686) | Mycolicibacterium smegmatis MC2 155 | |
| 2 | B, F (B, E) | DNA (5'-D(P*GP*CP*GP*AP*GP*CP*G)-3') | polymer | 7 | 2163.4 | 2 | synthetic construct | ||
| 3 | C, G (C, F) | DNA (5'-D(*CP*GP*CP*TP*CP*GP*CP*AP*AP*CP*GP*CP*A)-3') | polymer | 15 | 4540.0 | 2 | synthetic construct | ||
| 4 | D, H (H, G) | DNA (5'-D(P*TP*GP*CP*GP*(DUI))-3') | polymer | 7 | 2115.4 | 2 | synthetic construct | ||
| 5 | I, J, S, T (A, D) | MANGANESE (II) ION | non-polymer | 54.9 | 4 | Chemie (MN) | |||
| 6 | K (A) | 3'-DEOXY-URIDINE 5'-TRIPHOSPHATE | non-polymer | 470.2 | 1 | Chemie (U3H) | |||
| 7 | L, V (A, D) | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
| 8 | M (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 9 | AA, BA, N, O, P... (D, A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 11 | Chemie (EDO) | |||
| 10 | U (D) | PYROPHOSPHATE | non-polymer | 178.0 | 1 | Chemie (PPV) | |||
| 11 | CA, DA, EA, FA (A, B, D, E) | water | water | 18.0 | 362 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 96470.6 | |
| Non-Polymers* | Number of molecules | 20 |
| Total formula weight | 1767.1 | |
| All* | Total formula weight | 98237.7 |
