6SA0
Ternary complex of Prim-PolC from Mycobacterium smegmatis with 2nt gapped DNA and UpNHpp
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, E (A, D) | DNA polymerase LigD, polymerase domain | polymer | 350 | 39416.5 | 2 | UniProt (A0R5T1) Pfam (PF21686) | Mycolicibacterium smegmatis MC2 155 | |
| 2 | B, F (B, E) | DNA (5'-D(P*GP*CP*GP*AP*GP*CP*G)-3') | polymer | 7 | 2163.4 | 2 | synthetic construct | ||
| 3 | C, G (C, F) | DNA (5'-D(*CP*GP*CP*TP*CP*GP*CP*AP*AP*CP*GP*CP*A)-3') | polymer | 15 | 4540.0 | 2 | synthetic construct | ||
| 4 | D, H (H, G) | DNA (5'-D(P*TP*GP*CP*GP)-3') | polymer | 6 | 1825.2 | 2 | synthetic construct | ||
| 5 | I, O (A, D) | 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine | non-polymer | 483.2 | 2 | Chemie (2KH) | |||
| 6 | J, K, P, Q (A, D) | MANGANESE (II) ION | non-polymer | 54.9 | 4 | Chemie (MN) | |||
| 7 | L (A) | CACODYLATE ION | non-polymer | 137.0 | 1 | Chemie (CAC) | |||
| 8 | M, N, R (A, D) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 3 | Chemie (EDO) | |||
| 9 | S, T, U, V, W... (A, B, C, H, D...) | water | water | 18.0 | 458 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 95890.3 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 1509.3 | |
| All* | Total formula weight | 97399.6 |
