6S21
Metabolism of multiple glycosaminoglycans by bacteroides thetaiotaomicron is orchestrated by a versatile core genetic locus (BT33494S-sulf)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C | Endo-4-O-sulfatase | polymer | 513 | 58650.5 | 3 | UniProt (Q8A2F6) Pfam (PF00884) Pfam (PF01663) Pfam (PF16347) In PDB | Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) | |
2 | D, E, F | 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranuronic acid | branched | 635.5 | 3 | In PDB GlyTouCan (G72094XQ) | |||
3 | A, B, C | CALCIUM ION | non-polymer | 40.1 | 3 | Chemie (CA) | |||
4 | water | water | 18.0 | 49 | Chemie (HOH) |
Sequence modifications
A, B, C: 17 - 508 (UniProt: Q8A2F6)
PDB | External Database | Details |
---|---|---|
Met -4 | - | initiating methionine |
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
Ser -1 | - | expression tag |
His 0 | - | expression tag |
His 1 | - | expression tag |
His 2 | - | expression tag |
His 3 | - | expression tag |
His 4 | - | expression tag |
His 5 | - | expression tag |
Ser 6 | - | expression tag |
Ser 7 | - | expression tag |
Gly 8 | - | expression tag |
Leu 9 | - | expression tag |
Val 10 | - | expression tag |
Pro 11 | - | expression tag |
Arg 12 | - | expression tag |
Gly 13 | - | expression tag |
Ser 14 | - | expression tag |
His 15 | - | expression tag |
Met 16 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 175951.6 | |
Branched | Number of molecules | 3 |
Total formula weight | 1906.5 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 120.2 | |
All* | Total formula weight | 177978.4 |