6S0V
The crystal structure of kanamycin B dioxygenase (KanJ) from Streptomyces kanamyceticus in complex with nickel, neamine and sulfate
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Kanamycin B dioxygenase | polymer | 288 | 31841.1 | 6 | UniProt (Q6L732) Pfam (PF05721) | Streptomyces kanamyceticus | Kanamycin biosynthesis protein J |
| 2 | EA, G, L, P, T... (F, A, B, C, D...) | NICKEL (II) ION | non-polymer | 58.7 | 6 | Chemie (NI) | |||
| 3 | AA, BA, CA, FA, GA... (E, F, A, B, C...) | SULFATE ION | non-polymer | 96.1 | 18 | Chemie (SO4) | |||
| 4 | DA, JA, K, O, S... (E, F, A, B, C...) | (1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranoside | non-polymer | 322.4 | 6 | Chemie (XXX) | |||
| 5 | KA, LA, MA, NA, OA... (A, B, C, D, E...) | water | water | 18.0 | 145 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 1 - 285 (UniProt: Q6L732)
| PDB | External Database | Details |
|---|---|---|
| Ser -2 | - | expression tag |
| Asn -1 | - | expression tag |
| Ala 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 191046.6 | |
| Non-Polymers* | Number of molecules | 30 |
| Total formula weight | 4015.4 | |
| All* | Total formula weight | 195062.0 |
