6RY7
Crystal structure of Dfg5 from Chaetomium thermophilum in complex with laminaribiose
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Mannan endo-1,6-alpha-mannosidase | polymer | 443 | 49546.2 | 1 | UniProt (G0S3F2) Pfam (PF03663) | Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) | |
| 2 | B (B) | beta-D-glucopyranose-(1-3)-beta-D-glucopyranose | branched | 342.3 | 1 | In PDB BIRD (PRD_900024) GlyTouCan (G36535HU) | beta-laminaribiose | ||
| 3 | C (A) | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
| 4 | D (A) | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
| 5 | E (A) | water | water | 18.0 | 481 | Chemie (HOH) |
Sequence modifications
A: 30 - 449 (UniProt: G0S3F2)
| PDB | External Database | Details |
|---|---|---|
| Met 7 | - | initiating methionine |
| Gly 8 | - | expression tag |
| Ser 9 | - | expression tag |
| Ser 10 | - | expression tag |
| His 11 | - | expression tag |
| His 12 | - | expression tag |
| His 13 | - | expression tag |
| His 14 | - | expression tag |
| His 15 | - | expression tag |
| His 16 | - | expression tag |
| Ser 17 | - | expression tag |
| Ser 18 | - | expression tag |
| Gly 19 | - | expression tag |
| Leu 20 | - | expression tag |
| Val 21 | - | expression tag |
| Pro 22 | - | expression tag |
| Arg 23 | - | expression tag |
| Gly 24 | - | expression tag |
| Ser 25 | - | expression tag |
| His 26 | - | expression tag |
| Met 27 | - | expression tag |
| Ala 28 | - | expression tag |
| Ser 29 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 49546.2 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 342.3 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 190.3 | |
| All* | Total formula weight | 50078.7 |
