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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

6RXZ

Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1UAPeriodic tryptophan protein 2-like proteinpolymer904100817.51UniProt (G0SF93)
Pfam (PF00400)
Pfam (PF04003)
In PDB		Chaetomium thermophilum
2UBUtp2polymer907103960.71UniProt (G0SDW0)
Pfam (PF04147)
In PDB		Chaetomium thermophilum
3UCUtp3polymer64873214.61UniProt (G0S4H3)
Pfam (PF04000)
Pfam (PF09368)
In PDB		Chaetomium thermophilum
4UDUtp4polymer88497696.51UniProt (G0SCT7)
Pfam (PF00400)
In PDB		Chaetomium thermophilum
5UFUtp6polymer41446924.81UniProt (G0S387)
Pfam (PF08640)
In PDB		Chaetomium thermophilum
6UGUtp7polymer55863629.41UniProt (G0RZ99)
Pfam (PF00400)
Pfam (PF08149)
In PDB		Chaetomium thermophilum
7UJUTP10polymer1802198508.41UniProt (G0S5L1)
Pfam (PF12397)
Pfam (PF08146)
In PDB		Chaetomium thermophilum
8UKU3 small nucleolar RNA-associated protein 11polymer27031379.71UniProt (G0SF32)
Pfam (PF03998)
In PDB		Chaetomium thermophilumU3 snoRNA-associated protein 11
9ULUtp12polymer962107573.01UniProt (G0RZL9)
Pfam (PF00400)
Pfam (PF04003)
In PDB		Chaetomium thermophilum
10UMUtp13polymer912100430.41UniProt (G0SG95)
Pfam (PF00400)
Pfam (PF08625)
In PDB		Chaetomium thermophilum
11UNUtp14polymer938104741.41UniProt (G0S8Y4)
Pfam (PF04615)
In PDB		Chaetomium thermophilum
12UOUtp15polymer55760524.11UniProt (G0SEI5)
Pfam (PF09384)
Pfam (PF00400)
In PDB		Chaetomium thermophilum
13UQUtp17polymer960105039.71UniProt (G0SCS8)
Pfam (PF00400)
In PDB		Chaetomium thermophilum
14URUtp18polymer61869055.11UniProt (G0SBN9)
In PDB		Chaetomium thermophilum
15UUPutative U3 snoRNP proteinpolymer1049115122.01UniProt (G0S872)
Pfam (PF00400)
Pfam (PF04192)
In PDB		Chaetomium thermophilum
16UXUtp24polymer19322136.01Chaetomium thermophilum
17UZUtp30polymer39143700.51UniProt (G0S7X0)
Pfam (PF00687)
In PDB		Chaetomium thermophilum
18CA, CBNop1polymer31332960.82UniProt (G0SGY2)
Pfam (PF01269)
In PDB		Chaetomium thermophilum
19CCPutative nucleolar proteinpolymer52357830.71UniProt (G0S2U4)
Pfam (PF08156)
Pfam (PF01798)
In PDB		Chaetomium thermophilum
20CDNop58polymer58264292.11UniProt (G0RYF6)
Pfam (PF08156)
Pfam (PF01798)
In PDB		Chaetomium thermophilum
21CE, CFSnu13polymer12713831.92UniProt (G0SGM0)
Pfam (PF01248)
In PDB		Chaetomium thermophilum
22CGRrp9polymer63069610.41UniProt (G0SG51)
Pfam (PF00400)
In PDB		Chaetomium thermophilum
23CHRNA 3'-terminal phosphate cyclase-like proteinpolymer41143399.81UniProt (G0S0B1)
Pfam (PF01137)
Pfam (PF05189)
In PDB		Chaetomium thermophilum
24CIBms1polymer1163134172.31UniProt (G0S445)
Pfam (PF08142)
Pfam (PF04950)
In PDB		Chaetomium thermophilum
25CJImp3polymer18321802.41UniProt (G0SDL4)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Chaetomium thermophilum
26CKPutative U3 small nucleolar ribonucleoproteinpolymer29734216.31UniProt (G0SE90)
Pfam (PF04427)
In PDB		Chaetomium thermophilum
27CLPutative U3 small nucleolar ribonucleoprotein proteinpolymer78586082.11UniProt (G0S9I7)
Pfam (PF04006)
In PDB		Chaetomium thermophilum
28CMSof1polymer44650869.81UniProt (G0RY94)
Pfam (PF00400)
Pfam (PF04158)
In PDB		Chaetomium thermophilum
29CN, COEmg1polymer25227936.22UniProt (G0SAY9)
Pfam (PF03587)
In PDB		Chaetomium thermophilum
30CPKRR1 small subunit processome componentpolymer32237500.81UniProt (G0S3V7)
Pfam (PF17903)
Pfam (PF21800)
In PDB		Chaetomium thermophilumKRR-R motif-containing protein 1
31CQPre-rRNA-processing protein PNO1polymer25928715.01UniProt (G0S3T2)
In PDB		Chaetomium thermophilum
32CR, CSKre33polymer1073119795.12UniProt (G0S273)
Pfam (PF08351)
Pfam (PF05127)
Pfam (PF13718)
Pfam (PF13725)
In PDB		Chaetomium thermophilum
33CTFcf2polymer20322569.11UniProt (G0S4E3)
Pfam (PF08698)
In PDB		Chaetomium thermophilum
34Cb40S ribosomal protein S4polymer26429800.81UniProt (G0S1A6)
Pfam (PF08071)
Pfam (PF00900)
Pfam (PF00467)
Pfam (PF16121)
In PDB		Chaetomium thermophilum
35Cc40S ribosomal protein s5-like proteinpolymer21223679.21UniProt (G0S1Z0)
Pfam (PF00177)
In PDB		Chaetomium thermophilum
36Cd40S ribosomal protein S6polymer23927490.11UniProt (G0RY43)
Pfam (PF01092)
In PDB		Chaetomium thermophilum
37Ce40S ribosomal protein S7polymer20323084.71UniProt (G0S8C4)
Pfam (PF01251)
In PDB		Chaetomium thermophilum
38Cf40S ribosomal protein S8polymer20223102.41UniProt (G0RY45)
Pfam (PF01201)
In PDB		Chaetomium thermophilum
39Cg40S ribosomal protein s9-like proteinpolymer19022029.81UniProt (G0S0Z4)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Chaetomium thermophilum
40Ch40S ribosomal protein S13-like proteinpolymer15116912.91UniProt (G0RZM9)
Pfam (PF08069)
Pfam (PF00312)
In PDB		Chaetomium thermophilum
41Ci40S ribosomal protein S14-like proteinpolymer15016071.51UniProt (G0SFL1)
Pfam (PF00411)
In PDB		Chaetomium thermophilum
42Cj40S ribosomal protein S16-like proteinpolymer14315962.81UniProt (G0SBR7)
Pfam (PF00380)
In PDB		Chaetomium thermophilum
43Ck40S ribosomal protein S11-like proteinpolymer16118698.21UniProt (G0SF00)
Pfam (PF16205)
Pfam (PF00366)
In PDB		Chaetomium thermophilum
44Cm40S ribosomal protein S22-like proteinpolymer13014905.51UniProt (G0SHI0)
Pfam (PF00410)
In PDB		Chaetomium thermophilum
45Cn40S ribosomal protein s23-like proteinpolymer14515934.71UniProt (G0RY17)
Pfam (PF00164)
In PDB		Chaetomium thermophilum
46Co40S ribosomal protein S24polymer13615535.31UniProt (P0CU28)
Pfam (PF01282)
In PDB		Chaetomium thermophilum
47Cp40S ribosomal protein S28-like proteinpolymer687742.01UniProt (G0S9M9)
Pfam (PF01200)
In PDB		Chaetomium thermophilum
48CUFaf1polymer31134576.61UniProt (G0S5F1)
In PDB		Chaetomium thermophilum
49C135S ribosomal RNApolymer2323749031.21Chaetomium thermophilum
50C2U3 snoRNApolymer23073966.51Chaetomium thermophilum
51UVU3 small nucleolar RNA-associated protein 22polymer1171131105.41UniProt (G0S2E0)
Pfam (PF17404)
Pfam (PF17405)
Pfam (PF17406)
Pfam (PF17407)
Pfam (PF03813)
Pfam (PF17403)
In PDB		Chaetomium thermophilum
52CVRrp7polymer32236366.61UniProt (G0SDB8)
Pfam (PF17799)
Pfam (PF12923)
In PDB		Chaetomium thermophilum
53CWRibosome biogenesis protein ENP2polymer66875833.81UniProt (G0S902)
Pfam (PF08159)
In PDB		Chaetomium thermophilum
54UTUtp20polymer2612295278.91UniProt (G0SHP3)
Pfam (PF07539)
Pfam (PF20416)
In PDB		Chaetomium thermophilum
55UHUtp8polymer930102421.11UniProt (P0CT47)
In PDB		Chaetomium thermophilum
56UE, UIUtp5polymer41044663.42UniProt (G0RYX2)
Pfam (PF04003)
In PDB		Chaetomium thermophilum
57USNoc4polymer54963331.71UniProt (G0RZL4)
Pfam (PF03914)
In PDB		Chaetomium thermophilum
58ClRps18polymer15617826.71UniProt (G0S6J7)
Pfam (PF00416)
In PDB		Chaetomium thermophilum
59CXEnp1polymer48054319.61UniProt (G0S5J4)
Pfam (PF05291)
In PDB		Chaetomium thermophilum
60CYU3 small nucleolar ribonucleoprotein protein lcp5-like proteinpolymer38142625.41UniProt (G0S7Z2)
Pfam (PF04000)
In PDB		Chaetomium thermophilum
61CZBfr2polymer60969040.61UniProt (G0SAJ6)
Pfam (PF13339)
Pfam (PF08164)
In PDB		Chaetomium thermophilum
62UPUtp16polymer36440726.01UniProt (G0S612)
Pfam (PF08297)
In PDB		Chaetomium thermophilum
63CzRrp5polymer1796197449.21UniProt (G0S6T5)
Pfam (PF00575)
In PDB		Chaetomium thermophilum
64UXZINC IONnon-polymer65.41Chemie (ZN)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains68
Total formula weight4828738.5
Non-Polymers*Number of molecules1
Total formula weight65.4
All*Total formula weight4828803.9
*Water molecules are not included.

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PDB entries from 2024-04-17

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