6RXX
Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | UA | Periodic tryptophan protein 2-like protein | polymer | 904 | 100817.5 | 1 | UniProt (G0SF93) Pfam (PF00400) Pfam (PF04003) In PDB | Chaetomium thermophilum | |
2 | UC | Utp3 | polymer | 648 | 73214.6 | 1 | UniProt (G0S4H3) Pfam (PF04000) Pfam (PF09368) In PDB | Chaetomium thermophilum | |
3 | UF | Utp6 | polymer | 414 | 46924.8 | 1 | UniProt (G0S387) Pfam (PF08640) In PDB | Chaetomium thermophilum | |
4 | UG | Utp7 | polymer | 558 | 63629.4 | 1 | UniProt (G0RZ99) Pfam (PF00400) Pfam (PF08149) In PDB | Chaetomium thermophilum | |
5 | UK | U3 small nucleolar RNA-associated protein 11 | polymer | 270 | 31379.7 | 1 | UniProt (G0SF32) Pfam (PF03998) In PDB | Chaetomium thermophilum | U3 snoRNA-associated protein 11 |
6 | UL | Utp12 | polymer | 962 | 107573.0 | 1 | UniProt (G0RZL9) Pfam (PF00400) Pfam (PF04003) In PDB | Chaetomium thermophilum | |
7 | UM | Utp13 | polymer | 912 | 100430.4 | 1 | UniProt (G0SG95) Pfam (PF00400) Pfam (PF08625) In PDB | Chaetomium thermophilum | |
8 | UN | Utp14 | polymer | 938 | 104741.4 | 1 | UniProt (G0S8Y4) Pfam (PF04615) In PDB | Chaetomium thermophilum | |
9 | UR | Utp18 | polymer | 618 | 69055.1 | 1 | UniProt (G0SBN9) In PDB | Chaetomium thermophilum | |
10 | UU | Putative U3 snoRNP protein | polymer | 1049 | 115122.0 | 1 | UniProt (G0S872) Pfam (PF00400) Pfam (PF04192) In PDB | Chaetomium thermophilum | |
11 | UX | Utp24 | polymer | 193 | 22136.0 | 1 | Chaetomium thermophilum | ||
12 | CJ | Imp3 | polymer | 183 | 21802.4 | 1 | UniProt (G0SDL4) Pfam (PF00163) Pfam (PF01479) In PDB | Chaetomium thermophilum | |
13 | CK | Putative U3 small nucleolar ribonucleoprotein | polymer | 297 | 34216.3 | 1 | UniProt (G0SE90) Pfam (PF04427) In PDB | Chaetomium thermophilum | |
14 | CL | Putative U3 small nucleolar ribonucleoprotein protein | polymer | 785 | 86082.1 | 1 | UniProt (G0S9I7) Pfam (PF04006) In PDB | Chaetomium thermophilum | |
15 | CM | Sof1 | polymer | 446 | 50869.8 | 1 | UniProt (G0RY94) Pfam (PF00400) Pfam (PF04158) In PDB | Chaetomium thermophilum | |
16 | CN, CO | Emg1 | polymer | 252 | 27936.2 | 2 | UniProt (G0SAY9) Pfam (PF03587) In PDB | Chaetomium thermophilum | |
17 | CP | KRR1 small subunit processome component | polymer | 322 | 37500.8 | 1 | UniProt (G0S3V7) Pfam (PF17903) Pfam (PF21800) In PDB | Chaetomium thermophilum | KRR-R motif-containing protein 1 |
18 | CQ | Pre-rRNA-processing protein PNO1 | polymer | 259 | 28715.0 | 1 | UniProt (G0S3T2) In PDB | Chaetomium thermophilum | |
19 | Ca | 40S ribosomal protein S1 | polymer | 255 | 29245.2 | 1 | UniProt (G0S7T8) Pfam (PF01015) In PDB | Chaetomium thermophilum | |
20 | Cc | 40S ribosomal protein s5-like protein | polymer | 212 | 23679.2 | 1 | UniProt (G0S1Z0) Pfam (PF00177) In PDB | Chaetomium thermophilum | |
21 | Ce | 40S ribosomal protein S7 | polymer | 203 | 23084.7 | 1 | UniProt (G0S8C4) Pfam (PF01251) In PDB | Chaetomium thermophilum | |
22 | Cg | 40S ribosomal protein s9-like protein | polymer | 190 | 22029.8 | 1 | UniProt (G0S0Z4) Pfam (PF00163) Pfam (PF01479) In PDB | Chaetomium thermophilum | |
23 | Ch | 40S ribosomal protein S13-like protein | polymer | 151 | 16912.9 | 1 | UniProt (G0RZM9) Pfam (PF08069) Pfam (PF00312) In PDB | Chaetomium thermophilum | |
24 | Ci | 40S ribosomal protein S14-like protein | polymer | 150 | 16071.5 | 1 | UniProt (G0SFL1) Pfam (PF00411) In PDB | Chaetomium thermophilum | |
25 | Cj | 40S ribosomal protein S16-like protein | polymer | 143 | 15962.8 | 1 | UniProt (G0SBR7) Pfam (PF00380) In PDB | Chaetomium thermophilum | |
26 | Cm | 40S ribosomal protein S22-like protein | polymer | 130 | 14905.5 | 1 | UniProt (G0SHI0) Pfam (PF00410) In PDB | Chaetomium thermophilum | |
27 | Cn | 40S ribosomal protein s23-like protein | polymer | 145 | 15934.7 | 1 | UniProt (G0RY17) Pfam (PF00164) In PDB | Chaetomium thermophilum | |
28 | Cp | 40S ribosomal protein S28-like protein | polymer | 68 | 7742.0 | 1 | UniProt (G0S9M9) Pfam (PF01200) In PDB | Chaetomium thermophilum | |
29 | Cq | Ribosomal protein s27-like protein | polymer | 82 | 8923.6 | 1 | UniProt (G0S1S4) Pfam (PF01667) In PDB | Chaetomium thermophilum | |
30 | CU | Faf1 | polymer | 311 | 34576.6 | 1 | UniProt (G0S5F1) In PDB | Chaetomium thermophilum | |
31 | C1 | 35S ribosomal RNA | polymer | 1859 | 599293.3 | 1 | Chaetomium thermophilum | ||
32 | UV | U3 small nucleolar RNA-associated protein 22 | polymer | 1171 | 131105.4 | 1 | UniProt (G0S2E0) Pfam (PF03813) Pfam (PF17403) Pfam (PF17404) Pfam (PF17405) Pfam (PF17406) Pfam (PF17407) In PDB | Chaetomium thermophilum | |
33 | CV | Rrp7 | polymer | 322 | 36366.6 | 1 | UniProt (G0SDB8) Pfam (PF17799) Pfam (PF12923) In PDB | Chaetomium thermophilum | |
34 | Cl | Putative ribosomal protein | polymer | 156 | 17826.7 | 1 | UniProt (G0S6J7) Pfam (PF00416) In PDB | Chaetomium thermophilum | |
35 | CH | RNA 3'-terminal phosphate cyclase-like protein | polymer | 411 | 43399.8 | 1 | UniProt (G0S0B1) Pfam (PF01137) Pfam (PF05189) In PDB | Chaetomium thermophilum | |
36 | CI | Bms1 | polymer | 1163 | 134172.3 | 1 | UniProt (G0S445) Pfam (PF08142) Pfam (PF04950) In PDB | Chaetomium thermophilum | |
37 | CR, CS | Kre33 | polymer | 1073 | 119795.1 | 2 | UniProt (G0S273) Pfam (PF08351) Pfam (PF05127) Pfam (PF13718) Pfam (PF13725) In PDB | Chaetomium thermophilum | 18S rRNA cytosine acetyltransferase |
38 | Cb | 40S ribosomal protein S4 | polymer | 264 | 29800.8 | 1 | UniProt (G0S1A6) Pfam (PF08071) Pfam (PF00900) Pfam (PF00467) Pfam (PF16121) In PDB | Chaetomium thermophilum | |
39 | Cd | 40S ribosomal protein S6 | polymer | 239 | 27490.1 | 1 | UniProt (G0RY43) Pfam (PF01092) In PDB | Chaetomium thermophilum | |
40 | Cf | 40S ribosomal protein S8 | polymer | 202 | 23102.4 | 1 | UniProt (G0RY45) Pfam (PF01201) In PDB | Chaetomium thermophilum | |
41 | Ck | 40S ribosomal protein S11-like protein | polymer | 161 | 18698.2 | 1 | UniProt (G0SF00) Pfam (PF16205) Pfam (PF00366) In PDB | Chaetomium thermophilum | |
42 | Co | 40S ribosomal protein S24 | polymer | 136 | 15535.3 | 1 | UniProt (P0CU28) Pfam (PF01282) In PDB | Chaetomium thermophilum | |
43 | CW | Ribosome biogenesis protein ENP2 | polymer | 668 | 75833.8 | 1 | UniProt (G0S902) Pfam (PF08159) In PDB | Chaetomium thermophilum | |
44 | UT | Utp20 | polymer | 2612 | 295278.9 | 1 | UniProt (G0SHP3) Pfam (PF07539) Pfam (PF20416) In PDB | Chaetomium thermophilum | |
45 | CZ | Bfr2 | polymer | 609 | 69040.6 | 1 | UniProt (G0SAJ6) Pfam (PF13339) Pfam (PF08164) In PDB | Chaetomium thermophilum | |
46 | UB | Utp2 | polymer | 907 | 103960.7 | 1 | UniProt (G0SDW0) Pfam (PF04147) In PDB | Chaetomium thermophilum | |
47 | UD | Utp4 | polymer | 884 | 97696.5 | 1 | UniProt (G0SCT7) Pfam (PF00400) In PDB | Chaetomium thermophilum | |
48 | UJ | UTP10 | polymer | 1802 | 198508.4 | 1 | UniProt (G0S5L1) Pfam (PF12397) Pfam (PF08146) In PDB | Chaetomium thermophilum | |
49 | UO | Utp15 | polymer | 557 | 60524.1 | 1 | UniProt (G0SEI5) Pfam (PF00400) Pfam (PF09384) In PDB | Chaetomium thermophilum | |
50 | UQ | Utp17 | polymer | 960 | 105039.7 | 1 | UniProt (G0SCS8) Pfam (PF00400) In PDB | Chaetomium thermophilum | |
51 | CX | Enp1 | polymer | 480 | 54319.6 | 1 | UniProt (G0S5J4) Pfam (PF05291) In PDB | Chaetomium thermophilum | |
52 | UI, UE | Utp5 | polymer | 410 | 44663.4 | 2 | UniProt (G0RYX2) Pfam (PF04003) In PDB | Chaetomium thermophilum | |
53 | UP | Utp16 | polymer | 364 | 40726.0 | 1 | UniProt (G0S612) Pfam (PF08297) In PDB | Chaetomium thermophilum | |
54 | UH | Utp8 | polymer | 930 | 102421.1 | 1 | UniProt (P0CT47) In PDB | Chaetomium thermophilum | |
55 | US | Noc4 | polymer | 549 | 63331.7 | 1 | UniProt (G0RZL4) Pfam (PF03914) In PDB | Chaetomium thermophilum | |
56 | CA, CB | Nop1 | polymer | 313 | 32960.8 | 2 | UniProt (G0SGY2) Pfam (PF01269) In PDB | Chaetomium thermophilum | |
57 | CC | Putative nucleolar protein | polymer | 523 | 57830.7 | 1 | UniProt (G0S2U4) Pfam (PF08156) Pfam (PF01798) In PDB | Chaetomium thermophilum | |
58 | CD | Nop58 | polymer | 582 | 64292.1 | 1 | UniProt (G0RYF6) Pfam (PF08156) Pfam (PF01798) In PDB | Chaetomium thermophilum | |
59 | CE, CF | Snu13 | polymer | 127 | 13831.9 | 2 | UniProt (G0SGM0) Pfam (PF01248) In PDB | Chaetomium thermophilum | |
60 | CG | Rrp9 | polymer | 630 | 69610.4 | 1 | UniProt (G0SG51) Pfam (PF00400) In PDB | Chaetomium thermophilum | |
61 | CT | Fcf2 | polymer | 203 | 22569.1 | 1 | UniProt (G0S4E3) Pfam (PF08698) In PDB | Chaetomium thermophilum | |
62 | C2 | U3 snoRNA | polymer | 232 | 74578.9 | 1 | Chaetomium thermophilum | ||
63 | Cr | 40S ribosomal protein S19-like protein | polymer | 153 | 17151.3 | 1 | UniProt (G0SFK8) Pfam (PF01090) In PDB | Chaetomium thermophilum | |
64 | UX, Cq | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 68 |
Total formula weight | 4451157.9 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 130.8 | |
All* | Total formula weight | 4451288.7 |