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6RTP

THE 3D STRUCTURE OF [NIFESE] HYDROGENASE G50T VaRIANT FROM DESULFOVIBRIO VULGARIS HILDENBOROUGH AT 1.10 ANGSTROM RESOLUTION

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1APeriplasmic [NiFeSe] hydrogenase, small subunitpolymer28330261.61UniProt (Q72AS4)
Pfam (PF01058)
Pfam (PF14720)
In PDB
Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303)
2BPeriplasmic [NiFeSe] hydrogenase, large subunit, selenocysteine-containingpolymer49254469.21UniProt (Q72AS3)
Pfam (PF00374)
In PDB
Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303)
3AIRON/SULFUR CLUSTERnon-polymer351.63Chemie (SF4)
4Aoxygen-damaged SF4non-polymer383.61Chemie (6ML)
5A, BGLYCEROLnon-polymer92.13Chemie (GOL)
6BCARBONMONOXIDE-(DICYANO) IRONnon-polymer135.91Chemie (FCO)
7BNICKEL (II) IONnon-polymer58.71Chemie (NI)
8BFE (II) IONnon-polymer55.81Chemie (FE2)
9BHYDROSULFURIC ACIDnon-polymer34.11Chemie (H2S)
10BCHLORIDE IONnon-polymer35.51Chemie (CL)
11waterwater18.0799Chemie (HOH)
Sequence modifications
B: 12 - 495 (UniProt: Q72AS3)
PDBExternal DatabaseDetails
Trp 4-expression tag
Ser 5-expression tag
His 6-expression tag
Pro 7-expression tag
Gln 8-expression tag
Phe 9-expression tag
Glu 10-expression tag
Lys 11-expression tag
Thr 50Gly 50engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight84730.8
Non-Polymers*Number of molecules12
Total formula weight2034.8
All*Total formula weight86765.6
*Water molecules are not included.

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PDB entries from 2024-05-01

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