6ROI
Cryo-EM structure of the partially activated Drs2p-Cdc50p
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Probable phospholipid-transporting ATPase DRS2 | polymer | 1460 | 163730.8 | 1 | UniProt (P39524) Pfam (PF16209) Pfam (PF13246) Pfam (PF16212) In PDB | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | |
2 | C | Cell division control protein 50 | polymer | 413 | 47371.8 | 1 | UniProt (P25656) Pfam (PF03381) In PDB | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | |
3 | B | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
4 | D | beta-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G31886NL) | |||
5 | A | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
6 | A | (2R)-1-{[(R)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-tetrahydroxy-4-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate | non-polymer | 967.1 | 1 | Chemie (2Y5) | |||
7 | C | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
8 | water | water | 18.0 | 2 | Chemie (HOH) |
Sequence modifications
A: 1 - 1355 (UniProt: P39524)
C: 1 - 391 (UniProt: P25656)
PDB | External Database | Details |
---|---|---|
Gly 1356 | - | expression tag |
Gly 1357 | - | expression tag |
Gly 1358 | - | expression tag |
Gly 1359 | - | expression tag |
Leu 1360 | - | expression tag |
Val 1361 | - | expression tag |
Pro 1362 | - | expression tag |
Arg 1363 | - | expression tag |
Gly 1364 | - | expression tag |
Ser 1365 | - | expression tag |
Gly 1366 | - | expression tag |
Gly 1367 | - | expression tag |
Thr 1368 | - | expression tag |
Ala 1369 | - | expression tag |
Ala 1370 | - | expression tag |
Ala 1371 | - | expression tag |
Pro 1372 | - | expression tag |
Gly 1373 | - | expression tag |
Pro 1374 | - | expression tag |
Ala 1375 | - | expression tag |
Pro 1376 | - | expression tag |
Ala 1377 | - | expression tag |
Pro 1378 | - | expression tag |
Ala 1379 | - | expression tag |
Pro 1380 | - | expression tag |
Ala 1381 | - | expression tag |
Ser 1382 | - | expression tag |
Ala 1383 | - | expression tag |
Pro 1384 | - | expression tag |
Ala 1385 | - | expression tag |
Ala 1386 | - | expression tag |
Ala 1387 | - | expression tag |
Ala 1388 | - | expression tag |
Pro 1389 | - | expression tag |
Ala 1390 | - | expression tag |
Gly 1391 | - | expression tag |
Ala 1392 | - | expression tag |
Gly 1393 | - | expression tag |
Thr 1394 | - | expression tag |
Pro 1395 | - | expression tag |
Val 1396 | - | expression tag |
Thr 1397 | - | expression tag |
Ala 1398 | - | expression tag |
Pro 1399 | - | expression tag |
Leu 1400 | - | expression tag |
Ala 1401 | - | expression tag |
Gly 1402 | - | expression tag |
Thr 1403 | - | expression tag |
Ile 1404 | - | expression tag |
Trp 1405 | - | expression tag |
Lys 1406 | - | expression tag |
Val 1407 | - | expression tag |
Leu 1408 | - | expression tag |
Ala 1409 | - | expression tag |
Ser 1410 | - | expression tag |
Glu 1411 | - | expression tag |
Gly 1412 | - | expression tag |
Gln 1413 | - | expression tag |
Thr 1414 | - | expression tag |
Val 1415 | - | expression tag |
Ala 1416 | - | expression tag |
Ala 1417 | - | expression tag |
Gly 1418 | - | expression tag |
Glu 1419 | - | expression tag |
Val 1420 | - | expression tag |
Leu 1421 | - | expression tag |
Leu 1422 | - | expression tag |
Ile 1423 | - | expression tag |
Leu 1424 | - | expression tag |
Glu 1425 | - | expression tag |
Ala 1426 | - | expression tag |
Met 1427 | - | expression tag |
Lys 1428 | - | expression tag |
Met 1429 | - | expression tag |
Glu 1430 | - | expression tag |
Thr 1431 | - | expression tag |
Glu 1432 | - | expression tag |
Ile 1433 | - | expression tag |
Arg 1434 | - | expression tag |
Ala 1435 | - | expression tag |
Ala 1436 | - | expression tag |
Gln 1437 | - | expression tag |
Ala 1438 | - | expression tag |
Gly 1439 | - | expression tag |
Thr 1440 | - | expression tag |
Val 1441 | - | expression tag |
Arg 1442 | - | expression tag |
Gly 1443 | - | expression tag |
Ile 1444 | - | expression tag |
Ala 1445 | - | expression tag |
Val 1446 | - | expression tag |
Lys 1447 | - | expression tag |
Ala 1448 | - | expression tag |
Gly 1449 | - | expression tag |
Asp 1450 | - | expression tag |
Ala 1451 | - | expression tag |
Val 1452 | - | expression tag |
Ala 1453 | - | expression tag |
Val 1454 | - | expression tag |
Gly 1455 | - | expression tag |
Asp 1456 | - | expression tag |
Thr 1457 | - | expression tag |
Leu 1458 | - | expression tag |
Met 1459 | - | expression tag |
Thr 1460 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly 392 | - | expression tag |
Gly 393 | - | expression tag |
Gly 394 | - | expression tag |
Gly 395 | - | expression tag |
Leu 396 | - | expression tag |
Val 397 | - | expression tag |
Pro 398 | - | expression tag |
Arg 399 | - | expression tag |
Gly 400 | - | expression tag |
Ser 401 | - | expression tag |
Gly 402 | - | expression tag |
Gly 403 | - | expression tag |
His 404 | - | expression tag |
His 405 | - | expression tag |
His 406 | - | expression tag |
His 407 | - | expression tag |
His 408 | - | expression tag |
His 409 | - | expression tag |
His 410 | - | expression tag |
His 411 | - | expression tag |
His 412 | - | expression tag |
His 413 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 211102.6 | |
Branched | Number of molecules | 2 |
Total formula weight | 1173.1 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 1212.6 | |
All* | Total formula weight | 213488.3 |