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6RNM

Crystal structure of a complex between the LlFpg protein, a THF-DNA and an inhibitor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Formamidopyrimidine-DNA glycosylasepolymer27131116.21UniProt (A0A165FVI1)
Pfam (PF01149)
Pfam (PF06831)
Pfam (PF06827)
UniProt (by SIFTS) (P42371)
Lactococcus lactis subsp. cremorisFapy-DNA glycosylase,DNA-(apurinic or apyrimidinic site) lyase MutM,AP lyase MutM
2B
(D)
DNA (5'-D(*CP*TP*CP*TP*TP*TP*(3DR)P*TP*TP*TP*CP*TP*CP*G)-3')polymer144054.61synthetic construct
3C
(E)
DNA (5'-D(*GP*CP*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3')polymer144355.91synthetic construct
4D
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
5E
(A)
6-azanyl-9~{H}-purine-8-thiolnon-polymer167.21Chemie (KB5)
6F, G
(A)
GLYCEROLnon-polymer92.12Chemie (GOL)
7H, I, J
(A, D, E)
waterwater18.0449Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight39526.7
Non-Polymers*Number of molecules4
Total formula weight416.8
All*Total formula weight39943.5
*Water molecules are not included.

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PDB entries from 2024-11-13

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