6RF1
Crystal structure of the light-driven sodium pump KR2 in the pentameric "wet" form
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D, E | Sodium pumping rhodopsin | polymer | 288 | 32611.6 | 5 | UniProt (N0DKS8) Pfam (PF01036) In PDB | Dokdonia eikasta | |
2 | D, A, C, E, B | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate | non-polymer | 356.5 | 23 | Chemie (OLC) | |||
3 | B, D, A, C, E | EICOSANE | non-polymer | 282.5 | 35 | Chemie (LFA) | |||
4 | B, D, A, C | SODIUM ION | non-polymer | 23.0 | 5 | Chemie (NA) | |||
5 | B, D, A, C, E | octyl beta-D-glucopyranoside | non-polymer | 292.4 | 5 | Chemie (BOG) | |||
6 | B, D, A, C, E | RETINAL | non-polymer | 284.4 | 5 | Chemie (RET) | |||
7 | water | water | 18.0 | 199 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E: 1 - 280 (UniProt: N0DKS8)
PDB | External Database | Details |
---|---|---|
Leu 281 | - | expression tag |
Glu 282 | - | expression tag |
His 283 | - | expression tag |
His 284 | - | expression tag |
His 285 | - | expression tag |
His 286 | - | expression tag |
His 287 | - | expression tag |
His 288 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 5 |
Total formula weight | 163057.9 | |
Non-Polymers* | Number of molecules | 73 |
Total formula weight | 21088.5 | |
All* | Total formula weight | 184146.4 |