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6RER

Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 3B, focussed refinement of F1 head and rotor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E...
(A, B, C, D, E...)
Mitochondrial ATP synthase subunit cpolymer12712664.010UniProt (D7P7X5)
Pfam (PF00137)
Polytomella sp. Pringsheim 198.80
2K
(P)
Mitochondrial ATP synthase subunit OSCPpolymer22925530.81UniProt (D8V7I1)
Pfam (PF00213)
Polytomella sp. Pringsheim 198.80
3L
(Q)
epsilon: Polytomella F-ATP synthase epsilon subunitpolymer748205.51Pfam (PF04627)
UniProt (by SIFTS) (A0A5H1ZR74)
Polytomella sp. Pringsheim 198.80
4M
(R)
Mitochondrial ATP synthase subunit deltapolymer19920880.51UniProt (D7P7X6)
Pfam (PF02823)
Polytomella sp. Pringsheim 198.80
5N
(S)
ATP synthase gamma chain, mitochondrialpolymer31734639.61UniProt (Q4LDE7)
Pfam (PF00231)
Polytomella sp. Pringsheim 198.80
6O, P, Q
(T, U, V)
ATP synthase subunit alphapolymer56260766.23UniProt (A0ZW40)
Pfam (PF02874)
Pfam (PF00006)
Pfam (PF00306)
Polytomella sp. Pringsheim 198.80
7R, S, T
(X, Y, Z)
ATP synthase subunit betapolymer57461939.13UniProt (A0ZW41)
Pfam (PF00006)
Pfam (PF22919)
Pfam (PF02874)
Polytomella sp. Pringsheim 198.80
8U, W, Y
(T, U, V)
ADENOSINE-5'-TRIPHOSPHATEnon-polymer507.23Chemie (ATP)
9BA, DA, V, X, Z
(X, Z, T, U, V)
MAGNESIUM IONnon-polymer24.35Chemie (MG)
10AA, CA
(X, Z)
ADENOSINE-5'-DIPHOSPHATEnon-polymer427.22Chemie (ADP)
Sequence modifications
T, U, V: 1 - 562 (UniProt: A0ZW40)
PDBExternal DatabaseDetails
Arg 266Lys 266conflict
X, Y, Z: 1 - 574 (UniProt: A0ZW41)
PDBExternal DatabaseDetails
Ala 350Gly 350conflict
Leu 387Arg 387conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains20
Total formula weight584012.2
Non-Polymers*Number of molecules10
Total formula weight2497.5
All*Total formula weight586509.7
*Water molecules are not included.

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PDB entries from 2024-10-30

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