6R5C
Crystal structure of PPEP-1(W103F/E143A/Y178F) in complex with substrate peptide Ac-EVNPPVP-CONH2
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Pro-Pro endopeptidase | polymer | 198 | 21870.6 | 2 | UniProt (Q183R7) Pfam (PF07737) In PDB | Peptoclostridium difficile | PPEP-1,Zinc metalloprotease Zmp1 |
2 | C, D | ACE-GLU-VAL-ASN-PRO-PRO-VAL-LPD | polymer | 8 | 775.9 | 2 | Clostridioides difficile | ||
3 | A, B | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
4 | water | water | 18.0 | 322 | Chemie (HOH) |
Sequence modifications
A, B: 27 - 220 (UniProt: Q183R7)
PDB | External Database | Details |
---|---|---|
Gly 23 | - | expression tag |
Ser 24 | - | expression tag |
His 25 | - | expression tag |
Met 26 | - | expression tag |
Phe 103 | Trp 103 | engineered mutation |
Ala 143 | Glu 143 | engineered mutation |
Phe 178 | Tyr 178 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 45293.0 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 130.8 | |
All* | Total formula weight | 45423.8 |