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6QXA

Structure of membrane bound pyrophosphatase from Thermotoga maritima in complex with imidodiphosphate and N-[(2-amino-6-benzothiazolyl)methyl]-1H-indole-2-carboxamide (ATC)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
K(+)-stimulated pyrophosphate-energized sodium pumppolymer73578217.14UniProt (Q9S5X0)
Pfam (PF03030)
Thermotoga maritima MSB8Membrane-bound sodium-translocating pyrophosphatase,Pyrophosphate-energized inorganic pyrophosphatase,Na(+)-PPase,Tm-PPase
2AA, E, EA, F, FA...
(C, A, D, B)
MAGNESIUM IONnon-polymer24.320Chemie (MG)
3BA, J, JA, T
(C, A, D, B)
IMIDODIPHOSPHORIC ACIDnon-polymer177.04Chemie (2PN)
4K, KA, U
(A, D, B)
SODIUM IONnon-polymer23.03Chemie (NA)
5L, LA, V
(A, D, B)
POTASSIUM IONnon-polymer39.13Chemie (K)
6DA, M, N
(C, A)
~{N}-[(2-azanyl-3~{H}-1,3-benzothiazol-6-yl)methyl]-1~{H}-indole-2-carboxamidenon-polymer324.43Chemie (GQB)
7CA
(C)
(4S,5S)-1,2-DITHIANE-4,5-DIOLnon-polymer152.21Chemie (D1D)
8MA, NA, OA
(A, C, D)
waterwater18.08Chemie (HOH)
Sequence modifications
A, B, C, D: 2 - 726 (UniProt: Q9S5X0)
PDBExternal DatabaseDetails
Met -8-initiating methionine
Arg -7-expression tag
Gly -6-expression tag
Ser -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
His -1-expression tag
His 0-expression tag
His 1-expression tag
Leu 353Val 353conflict
Gly 395Ser 395conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight312868.6
Non-Polymers*Number of molecules34
Total formula weight2505.8
All*Total formula weight315374.3
*Water molecules are not included.

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PDB entries from 2025-07-09

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