6QLJ
Crystal structure of F181Q UbiX in complex with an oxidised N5-C1' adduct derived from DMAP
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Flavin prenyltransferase UbiX | polymer | 230 | 24777.3 | 1 | UniProt (A0A072ZCW8) Pfam (PF02441) In PDB | Pseudomonas aeruginosa | |
2 | A | 1-deoxy-1-[7,8-dimethyl-5-(3-methylbut-2-en-1-yl)-2,4-dioxo-1,3,4,5-tetrahydrobenzo[g]pteridin-10(2H)-yl]-5-O-phosphono -D-ribitol | non-polymer | 526.5 | 1 | Chemie (4LS) | |||
3 | A | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
4 | A | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
5 | water | water | 18.0 | 185 | Chemie (HOH) |
Sequence modifications
A: 1 - 209 (UniProt: A0A072ZCW8)
PDB | External Database | Details |
---|---|---|
Met -20 | - | initiating methionine |
His -19 | - | expression tag |
His -18 | - | expression tag |
His -17 | - | expression tag |
His -16 | - | expression tag |
His -15 | - | expression tag |
His -14 | - | expression tag |
Ser -13 | - | expression tag |
Ser -12 | - | expression tag |
Gly -11 | - | expression tag |
Val -10 | - | expression tag |
Asp -9 | - | expression tag |
Leu -8 | - | expression tag |
Gly -7 | - | expression tag |
Thr -6 | - | expression tag |
Glu -5 | - | expression tag |
Asn -4 | - | expression tag |
Leu -3 | - | expression tag |
Tyr -2 | - | expression tag |
Gln -1 | - | expression tag |
Ser 0 | - | expression tag |
Gln 181 | Phe 181 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 24777.3 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 644.4 | |
All* | Total formula weight | 25421.7 |