6QH8
Structure of knotted YibK from P. aeruginosa
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | tRNA (cytidine(34)-2'-O)-methyltransferase | polymer | 162 | 18178.8 | 4 | UniProt (A0A071LCY6) Pfam (PF00588) UniProt (by SIFTS) (Q9HU57) In PDB | Pseudomonas aeruginosa | tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL |
2 | A, B, C, D | SULFATE ION | non-polymer | 96.1 | 16 | Chemie (SO4) | |||
3 | B, D | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 3 | Chemie (PEG) | |||
4 | water | water | 18.0 | 164 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 6 - 157 (UniProt: A0A071LCY6)
PDB | External Database | Details |
---|---|---|
Gly 1 | - | expression tag |
Gly 2 | - | expression tag |
Gly 3 | - | expression tag |
Gly 4 | - | expression tag |
Ser 5 | - | expression tag |
Tyr 67 | Asp 62 | engineered mutation |
Gly 158 | - | expression tag |
Leu 159 | - | expression tag |
Pro 160 | - | expression tag |
Glu 161 | - | expression tag |
Thr 162 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 72715.0 | |
Non-Polymers* | Number of molecules | 19 |
Total formula weight | 1855.4 | |
All* | Total formula weight | 74570.4 |