6QDY
The crystal structure of Sporosarcina pasteurii urease in complex with its substrate urea
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Urease subunit gamma | polymer | 100 | 11134.9 | 1 | UniProt (A0A0H3YGY5) Pfam (PF00547) UniProt (by SIFTS) (P41022) | Sporosarcina pasteurii (Bacillus pasteurii) | Urea amidohydrolase subunit gamma |
| 2 | B (B) | Urease subunit beta | polymer | 122 | 13529.1 | 1 | UniProt (P41021) Pfam (PF00699) | Sporosarcina pasteurii (Bacillus pasteurii) | Urea amidohydrolase subunit beta |
| 3 | C (C) | Urease subunit alpha | polymer | 570 | 61575.6 | 1 | UniProt (A0A0H3YL32) Pfam (PF00449) Pfam (PF01979) UniProt (by SIFTS) (P41020) | Sporosarcina pasteurii (Bacillus pasteurii) | Urea amidohydrolase subunit alpha |
| 4 | D, E, F, G, H... (A, B, C) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 11 | Chemie (EDO) | |||
| 5 | I, R (B, C) | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
| 6 | J, K (C) | NICKEL (II) ION | non-polymer | 58.7 | 2 | Chemie (NI) | |||
| 7 | S (C) | FLUORIDE ION | non-polymer | 19.0 | 1 | Chemie (F) | |||
| 8 | T (C) | UREA | non-polymer | 60.1 | 1 | Chemie (URE) | |||
| 9 | U, V, W (A, B, C) | water | water | 18.0 | 872 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 86239.6 | |
| Non-Polymers* | Number of molecules | 17 |
| Total formula weight | 1071.3 | |
| All* | Total formula weight | 87310.9 |
