6Q8H
Structure of Fucosylated D-antimicrobial peptide SB10 in complex with the Fucose-binding lectin PA-IIL at 1.707 Angstrom resolution
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Fucose-binding lectin | polymer | 114 | 11734.7 | 1 | UniProt (A0A069Q9V4) Pfam (PF07472) UniProt (by SIFTS) (Q9HYN5) | Pseudomonas aeruginosa | Fucose-binding lectin II (PA-IIL),Fucose-binding lectin PA-IIL |
| 2 | B, C (B, C) | SB10 | polymer | 13 | 1545.0 | 2 | synthetic construct | ||
| 3 | D, E (A) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) PubChem (271) | |||
| 4 | F, H (B, C) | 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid | non-polymer | 206.2 | 2 | Chemie (ZDC) PubChem (22086245) PubChem (58281208) PubChem (59828179) PubChem (59899094) PubChem (67963326) PubChem (67963545) PubChem (71050425) PubChem (134517638) PubChem (137350205) PubChem (164138323) | |||
| 5 | G, I (B, C) | AMINO GROUP | non-polymer | 16.0 | 2 | Chemie (NH2) PubChem (123329) | |||
| 6 | J, K, L (A, B, C) | water | water | 18.0 | 177 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 14824.7 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 524.6 | |
| All* | Total formula weight | 15349.3 |
