6Q85
Structure of Fucosylated D-antimicrobial peptide SB11 in complex with the Fucose-binding lectin PA-IIL at 1.990 Angstrom resolution
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, G (A, B, C, D) | Fucose-binding lectin | polymer | 114 | 11734.7 | 4 | UniProt (A0A069Q9V4) Pfam (PF07472) UniProt (by SIFTS) (Q9HYN5) | Pseudomonas aeruginosa | Fucose-binding lectin II (PA-IIL),Fucose-binding lectin PA-IIL |
| 2 | B, D, F, H (E, F, G, H) | SB11 | polymer | 12 | 1416.8 | 4 | synthetic construct | ||
| 3 | I, J, K, N, Q... (A, B, C, D) | CALCIUM ION | non-polymer | 40.1 | 8 | Chemie (CA) PubChem (271) | |||
| 4 | L, O, T, W (E, F, G, H) | 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid | non-polymer | 206.2 | 4 | Chemie (ZDC) PubChem (22086245) PubChem (58281208) PubChem (59828179) PubChem (59899094) PubChem (67963326) PubChem (67963545) PubChem (71050425) PubChem (134517638) PubChem (137350205) PubChem (164138323) | |||
| 5 | M, P, U, X (E, F, G, H) | AMINO GROUP | non-polymer | 16.0 | 4 | Chemie (NH2) PubChem (123329) | |||
| 6 | AA, BA, CA, DA, EA... (B, F, C, G, D...) | water | water | 18.0 | 292 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 52606.2 | |
| Non-Polymers* | Number of molecules | 16 |
| Total formula weight | 1209.5 | |
| All* | Total formula weight | 53815.7 |
