6Q79
Structure of Fucosylated D-antimicrobial peptide SB4 in complex with the Fucose-binding lectin PA-IIL at 2.009 Angstrom resolution
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, G (A, B, C, D) | Fucose-binding lectin | polymer | 114 | 11734.7 | 4 | UniProt (A0A069Q9V4) Pfam (PF07472) UniProt (by SIFTS) (Q9HYN5) | Pseudomonas aeruginosa | Fucose-binding lectin II (PA-IIL),Fucose-binding lectin PA-IIL |
| 2 | B, H (E, H) | SB4 | polymer | 13 | 1545.0 | 2 | synthetic construct | ||
| 3 | D, F (F, G) | SB4 incomplete | polymer | 6 | 749.9 | 2 | synthetic construct | ||
| 4 | I, J, K, N, O... (A, B, C, D) | CALCIUM ION | non-polymer | 40.1 | 8 | Chemie (CA) | |||
| 5 | L, Q, S, U (E, F, G, H) | 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid | non-polymer | 206.2 | 4 | Chemie (ZDC) | |||
| 6 | M, V (E, H) | AMINO GROUP | non-polymer | 16.0 | 2 | Chemie (NH2) | |||
| 7 | AA, BA, CA, DA, W... (C, G, D, H, A...) | water | water | 18.0 | 334 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 51528.7 | |
| Non-Polymers* | Number of molecules | 14 |
| Total formula weight | 1177.4 | |
| All* | Total formula weight | 52706.2 |
