6Q2L
The structure of the Streptococcus gordonii surface protein SspB in complex with TEV peptide provides clues to the adherence of oral streptococcal adherence to salivary agglutinin
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Agglutinin receptor | polymer | 325 | 35969.6 | 1 | UniProt (P16952) Pfam (PF06696) Pfam (PF08363) In PDB | Streptococcus gordonii | SSP-5 |
2 | A | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
3 | A | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
4 | water | water | 18.0 | 351 | Chemie (HOH) |
Sequence modifications
A: 460 - 763 (UniProt: P16952)
PDB | External Database | Details |
---|---|---|
Met 458 | - | expression tag |
Gly 459 | - | expression tag |
Thr 538 | Arg 538 | conflict |
Thr 764 | - | expression tag |
Glu 765 | - | expression tag |
Asn 766 | - | expression tag |
Leu 767 | - | expression tag |
Tyr 768 | - | expression tag |
Phe 769 | - | expression tag |
Gln 770 | - | expression tag |
Gly 771 | - | expression tag |
Ala 772 | - | expression tag |
Ala 773 | - | expression tag |
Ala 774 | - | expression tag |
Leu 775 | - | expression tag |
Glu 776 | - | expression tag |
His 777 | - | expression tag |
His 778 | - | expression tag |
His 779 | - | expression tag |
His 780 | - | expression tag |
His 781 | - | expression tag |
His 782 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 35969.6 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 116.4 | |
All* | Total formula weight | 36086.0 |