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6Q02

Polymerase Eta-catalyzed insertion of the mismatched A opposite template cytarabine (AraC) residue

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase etapolymer43548645.81UniProt (Q9Y253)
Pfam (PF00817)
Pfam (PF21704)
Pfam (PF11799)
Homo sapiens (Human)RAD30 homolog A,Xeroderma pigmentosum variant type protein
2B
(P)
DNA Primer Strandpolymer82417.61synthetic construct
3C
(T)
DNA template containing a cytarabin (AraC) residuepolymer123663.41synthetic construct
4D, E
(A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
5F
(A)
2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosinenon-polymer490.21Chemie (DZ4)
6G, H
(A)
GLYCEROLnon-polymer92.12Chemie (GOL)
7I, J, K
(A, P, T)
waterwater18.0208Chemie (HOH)
Sequence modifications
A: 1 - 432 (UniProt: Q9Y253)
PDBExternal DatabaseDetails
Gly -2-expression tag
Pro -1-expression tag
His 0-expression tag
Met 406Cys 406engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight54726.8
Non-Polymers*Number of molecules5
Total formula weight723.0
All*Total formula weight55449.8
*Water molecules are not included.

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PDB entries from 2025-07-16

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