6PY9
Crystal structure of red kidney bean purple acid phosphatase in complex with adenosine diphosphate metavanadate
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, D, C | Fe(3+)-Zn(2+) purple acid phosphatase | polymer | 459 | 52926.4 | 4 | UniProt (P80366) Pfam (PF16656) Pfam (PF00149) Pfam (PF14008) In PDB | Phaseolus vulgaris (Kidney bean) | PAP,Iron(III)-zinc(II) purple acid phosphatase |
2 | E, F, G, H | alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 4 | In PDB GlyTouCan (G11971MR) | |||
3 | D, A, B, C | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
4 | D, A, B, C | FE (III) ION | non-polymer | 55.8 | 4 | Chemie (FE) | |||
5 | D, A, B, C | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 11 | Chemie (NAG) | |||
6 | A, C | ADP METAVANADATE | non-polymer | 527.1 | 2 | Chemie (AD9) | |||
7 | C, D, A, B | SULFATE ION | non-polymer | 96.1 | 11 | Chemie (SO4) | |||
8 | D, A, B | SODIUM ION | non-polymer | 23.0 | 3 | Chemie (NA) | |||
9 | A, C, D, B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 32 | Chemie (EDO) | |||
10 | B, A, C, D | GLYCEROL | non-polymer | 92.1 | 13 | Chemie (GOL) | |||
11 | B, A, C | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 4 | Chemie (PGE) | |||
12 | B | [(2~{R},3~{R},4~{R},5~{S})-2-(5-azanylimidazol-1-yl)-4-[[bis(oxidanyl)-[tris(oxidanyl)vanadiooxy]vanadio]oxy-bis(oxidanyl)vanadio]oxy-5-[[bis(oxidanyl)-[tris(oxidanyl)vanadiooxy]vanadio]oxymethyl]oxolan-3-yl]oxy-tris(oxidanyl)vanadium | non-polymer | 790.8 | 1 | Chemie (P4J) | |||
13 | B | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
14 | C | CITRATE ANION | non-polymer | 189.1 | 2 | Chemie (FLC) | |||
15 | water | water | 18.0 | 1301 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 211705.7 | |
Branched | Number of molecules | 4 |
Total formula weight | 2282.2 | |
Non-Polymers* | Number of molecules | 88 |
Total formula weight | 10086.8 | |
All* | Total formula weight | 224074.7 |