6PMD
Structure of ClpP from Staphylococcus aureus in complex with Acyldepsipeptide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... | ATP-dependent Clp protease proteolytic subunit | polymer | 203 | 22607.7 | 14 | UniProt (Q2G036) Pfam (PF00574) In PDB | Staphylococcus aureus (strain NCTC 8325) | Endopeptidase Clp |
| 2 | H, J, O, P, Q... | SHV-WFP-SER-PRO-YCP-ALA-MP8 Acyldepsipeptide | polymer | 7 | 790.9 | 11 | BIRD (PRD_002357) | synthetic construct | |
| 3 | B, C, D, E, F... | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 14 | Chemie (MPD) | |||
| 4 | water | water | 18.0 | 1167 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, I, K, L, M, N, S, T: 1 - 195 (UniProt: Q2G036)
| PDB | External Database | Details |
|---|---|---|
| Leu 196 | - | expression tag |
| Glu 197 | - | expression tag |
| His 198 | - | expression tag |
| His 199 | - | expression tag |
| His 200 | - | expression tag |
| His 201 | - | expression tag |
| His 202 | - | expression tag |
| His 203 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 25 |
| Total formula weight | 325207.4 | |
| Non-Polymers* | Number of molecules | 14 |
| Total formula weight | 1654.4 | |
| All* | Total formula weight | 326861.9 |
