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6PJ6

High resolution cryo-EM structure of E.coli 50S

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(I)
23S rRNApolymer2904941811.61Escherichia coli
2B
(J)
5S rRNApolymer11838177.81GenBank (1266940032)Escherichia coli
3C
(K)
50S ribosomal protein L2polymer27129663.21UniProt (A0A1X3I1Y9)
Pfam (PF00181)
Pfam (PF03947)
UniProt (by SIFTS) (P60422)
Escherichia coli
4D
(L)
50S ribosomal protein L3polymer20922277.51UniProt (P60438)
Pfam (PF00297)
Escherichia coliLarge ribosomal subunit protein uL3
5E
(M)
50S ribosomal protein L4polymer20122121.61UniProt (D7Z9F6)
Pfam (PF00573)
UniProt (by SIFTS) (P60723)
Escherichia coli
6F
(N)
50S ribosomal protein L5polymer17720073.21UniProt (H4KMS0)
Pfam (PF00281)
Pfam (PF00673)
UniProt (by SIFTS) (P62399)
Escherichia coli
7G
(O)
50S ribosomal protein L6polymer17618801.61UniProt (A0A080FKA9)
Pfam (PF00347)
UniProt (by SIFTS) (P0AG55)
Escherichia coli
8H
(P)
50S ribosomal protein L9polymer14915789.01UniProt (D7ZI15)
Pfam (PF03948)
Pfam (PF01281)
UniProt (by SIFTS) (P0A7R1)
Escherichia coli
9I
(Q)
50S ribosomal protein L11polymer13414020.31UniProt (A0A0A8UM35)
Pfam (PF03946)
Pfam (PF00298)
UniProt (by SIFTS) (P0A7J7)
Escherichia coli
10J
(R)
50S ribosomal protein L13polymer14216050.61UniProt (D7ZET0)
Pfam (PF00572)
UniProt (by SIFTS) (P0AA10)
Escherichia coli
11K
(S)
50S ribosomal protein L14polymer12213451.91UniProt (D7Y3D0)
Pfam (PF00238)
UniProt (by SIFTS) (P0ADY3)
Escherichia coli
12L
(T)
50S ribosomal protein L15polymer14415008.51UniProt (A0A037Y8L6)
Pfam (PF00828)
UniProt (by SIFTS) (P02413)
Escherichia coli
13M
(U)
50S ribosomal protein L16polymer13615327.31UniProt (D6IEL1)
Pfam (PF00252)
UniProt (by SIFTS) (P0ADY7)
Escherichia coli
14N
(V)
50S ribosomal protein L17polymer12013721.91UniProt (A0A0A8UJP9)
Pfam (PF01196)
UniProt (by SIFTS) (P0AG44)
Escherichia coli
15O
(W)
50S ribosomal protein L18polymer11712794.71UniProt (D7Z9H1)
Pfam (PF00861)
UniProt (by SIFTS) (P0C018)
Escherichia coli
16P
(X)
50S ribosomal protein L19polymer11413028.11UniProt (L2UTN8)
Pfam (PF01245)
UniProt (by SIFTS) (P0A7K6)
Escherichia coli
17Q
(Y)
50S ribosomal protein L20polymer11713396.81UniProt (W1HFV2)
Pfam (PF00453)
UniProt (by SIFTS) (P0A7L3)
Escherichia coli
18R
(Z)
50S ribosomal protein L21polymer10311586.41UniProt (D7ZEN7)
Pfam (PF00829)
UniProt (by SIFTS) (P0AG48)
Escherichia coli
19S
(a)
50S ribosomal protein L22polymer11012253.41UniProt (D7Z9G0)
Pfam (PF00237)
UniProt (by SIFTS) (P61175)
Escherichia coli
20T
(b)
50S ribosomal protein L23polymer9310546.51UniProt (J7RVN9)
Pfam (PF00276)
UniProt (by SIFTS) (P0ADZ0)
Escherichia coli
21U
(c)
50S ribosomal protein L24polymer10211078.91UniProt (U9Y1I5)
Pfam (PF00467)
Pfam (PF17136)
UniProt (by SIFTS) (P60624)
Escherichia coli
22V
(d)
50S ribosomal protein L25polymer9410713.51UniProt (D7XH79)
Pfam (PF01386)
UniProt (by SIFTS) (P68919)
Escherichia coli
23W
(e)
50S ribosomal protein L27polymer758174.41UniProt (A0A074HTA6)
Pfam (PF01016)
UniProt (by SIFTS) (P0A7L8)
Escherichia coli
24X
(f)
50S ribosomal protein L28polymer778896.41UniProt (T9AVR0)
Pfam (PF00830)
UniProt (by SIFTS) (P0A7M2)
Escherichia coli
25Y
(g)
50S ribosomal protein L29polymer627155.31UniProt (D8E8E5)
Pfam (PF00831)
UniProt (by SIFTS) (P0A7M6)
Escherichia coli
26Z
(h)
50S ribosomal protein L30polymer586423.61UniProt (L2VFR0)
Pfam (PF00327)
UniProt (by SIFTS) (P0AG51)
Escherichia coli
27AA
(i)
50S ribosomal protein L32polymer566332.21UniProt (V0ZMP5)
Pfam (PF01783)
UniProt (by SIFTS) (P0A7N4)
Escherichia coli
28BA
(j)
50S ribosomal protein L33polymer505814.81UniProt (A0A1X3LDF5)
Pfam (PF00471)
UniProt (by SIFTS) (P0A7N9)
Escherichia coli
29CA
(k)
50S ribosomal protein L34polymer465397.51UniProt (B7MGC4)
Pfam (PF00468)
UniProt (by SIFTS) (P0A7P5)
Escherichia coli
30DA
(l)
50S ribosomal protein L35polymer647181.81UniProt (L4VIS3)
Pfam (PF01632)
UniProt (by SIFTS) (P0A7Q1)
Escherichia coli
31EA
(m)
50S ribosomal protein L36polymer384377.41UniProt (A0A0E2L017)
Pfam (PF00444)
UniProt (by SIFTS) (P0A7Q6)
Escherichia coli
32AB, AC, AD, AE, AF...
(I, J, K, L)
MAGNESIUM IONnon-polymer24.3185Chemie (MG)
33HH
(K)
SODIUM IONnon-polymer23.01Chemie (NA)
34JH
(m)
ZINC IONnon-polymer65.41Chemie (ZN)
35AI, BI, CI, DI, EI...
(Y, Z, a, b, c...)
waterwater18.03897Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains31
Total formula weight1351447.6
Non-Polymers*Number of molecules187
Total formula weight4584.8
All*Total formula weight1356032.4
*Water molecules are not included.

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PDB entries from 2025-06-11

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