6P7Y

Crystal Structure of the Cedar henipavirus Attachment G Glycoprotein globular domain in complex with the receptor ephrin-B2

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, C	Attachment glycoprotein	polymer	430	49042.2	2	UniProt (J7H333) Pfam (PF00423) In PDB	Cedar virus
2	B, D	Ephrin-B2	polymer	144	16362.6	2	UniProt (P52799) Pfam (PF00812) In PDB	Homo sapiens (Human)	EPH-related receptor tyrosine kinase ligand 5,LERK-5,HTK ligand,HTK-L
3	E, M	beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		586.5	2	In PDB GlyTouCan (G15407YE)
4	F, L	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose	branched		570.5	2	In PDB GlyTouCan (G21290RB)
5	G	alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)][alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose	branched		1203.1	1	In PDB GlyTouCan (G11460AB)
6	H, I, J, K, O	alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		910.8	5	In PDB GlyTouCan (G22768VO)
7	N	alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		748.7	1	In PDB GlyTouCan (G22573RC)
8	A, C	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	2	Chemie (NAG)
9		water	water		18.0	161	Chemie (HOH)

Sequence modifications

B, D: 27 - 170 (UniProt: P52799)

PDB	External Database	Details
Gln 36	Asn 36	conflict

Contents of the asymmetric unit

Polymers	Number of chains	4
	Total formula weight	130809.7
Branched	Number of molecules	11
	Total formula weight	8820.1
Non-Polymers*	Number of molecules	2
	Total formula weight	442.4
All*	Total formula weight	140072.2

*Water molecules are not included.