6P06
Ternary structure of the E52D mutant of ANT-4 with Neomycin and AMPCPP
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Kanamycin nucleotidyltransferase | polymer | 256 | 29121.9 | 2 | UniProt (P05058) Pfam (PF07827) In PDB | Bacillus sp. | |
2 | A | NEOMYCIN | non-polymer | 614.6 | 2 | Chemie (NMY) | |||
3 | A, B | DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER | non-polymer | 505.2 | 2 | Chemie (APC) | |||
4 | A, B | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
5 | water | water | 18.0 | 199 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 253 (UniProt: P05058)
PDB | External Database | Details |
---|---|---|
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
His 0 | - | expression tag |
Asp 52 | Glu 52 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 58243.7 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 2400.0 | |
All* | Total formula weight | 60643.7 |