6OZI
Crystal structure of Ciona intestinalis (Ci) Endonuclease V (D234N) in complex with a 23mer DNA containing an inosine followed by a ribo-adenosine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | endonuclease V isoform X2 | polymer | 244 | 27612.1 | 2 | UniProt (A0A3Q0JV13) | Ciona intestinalis (Transparent sea squirt) | |
| 2 | C, D (C, D) | DNA/RNA (23-MER) | polymer | 23 | 7027.5 | 2 | synthetic construct | ||
| 3 | E, H, I, J (A, C, D) | POTASSIUM ION | non-polymer | 39.1 | 4 | Chemie (K) | |||
| 4 | F, G (A, B) | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 2 | Chemie (PGE) | |||
| 5 | K, L, M, N (A, B, C, D) | water | water | 18.0 | 439 | Chemie (HOH) |
Sequence modifications
A, B: 2 - 245 (UniProt: A0A3Q0JV13)
| PDB | External Database | Details |
|---|---|---|
| Asn 234 | Asp 234 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 69279.3 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 456.7 | |
| All* | Total formula weight | 69736.0 |
