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6OQA

Crystal structure of CEP250 bound to FKBP12 in the presence of FK506-like novel natural product

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, E, F
(A, B, E, F)
Peptidyl-prolyl cis-trans isomerase FKBP1Apolymer10811967.74UniProt (P62942)
Pfam (PF00254)
Homo sapiensPPIase FKBP1A,12 kDa FK506-binding protein,FKBP-12,Calstabin-1,FK506-binding protein 1A,FKBP-1A,Immunophilin FKBP12,Rotamase
2C, D, G, H
(C, D, G, H)
Centrosome-associated protein CEP250polymer9811429.84UniProt (Q9BV73)Homo sapiens (Human)250 kDa centrosomal protein,Cep250,Centrosomal Nek2-associated protein 1,C-Nap1,Centrosomal protein 2
3I, NA, O, QA
(A, E, B, F)
(3R,4E,7E,10R,11S,12R,13S,16R,17R,24aS)-11,17-dihydroxy-10,12,16-trimethyl-3-[(2R)-1-phenylbutan-2-yl]-6,9,10,11,12,13,14,15,16,17,22,23,24,24a-tetradecahydro-3H-13,17-epoxypyrido[2,1-c][1,4]oxazacyclohenicosine-1,18,19(21H)-trionenon-polymer609.84Chemie (60Z)
4BA, IA, J, JA, K...
(C, D, A, E, B...)
1,2-ETHANEDIOLnon-polymer62.116Chemie (EDO)
5CA, KA, LA, M, RA...
(C, D, A, F, G...)
DI(HYDROXYETHYL)ETHERnon-polymer106.110Chemie (PEG)
6N, Z
(A, B)
3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOLnon-polymer370.42Chemie (PE8)
7AA, GA, MA, VA
(B, C, D, G)
TRIETHYLENE GLYCOLnon-polymer150.24Chemie (PGE)
8DA, EA, FA, UA
(C, G)
TETRAETHYLENE GLYCOLnon-polymer194.24Chemie (PG4)
9HA
(D)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
10WA
(H)
MALONIC ACIDnon-polymer104.11Chemie (MLA)
11AB, BB, CB, DB, EB...
(C, D, E, F, G...)
waterwater18.0226Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight93590.1
Non-Polymers*Number of molecules42
Total formula weight6740.3
All*Total formula weight100330.4
*Water molecules are not included.

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PDB entries from 2024-11-06

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