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6OOR

Structure of 1B1 bound to mouse CD1d

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Antigen-presenting glycoprotein CD1d1polymer28532616.61UniProt (A0A0R4J090)
Pfam (PF16497)
Pfam (PF07654)
UniProt (by SIFTS) (P11609)
Mus musculus (Mouse)MCG3074,isoform CRA_a
2B
(B)
Beta-2-microglobulinpolymer9911660.41UniProt (P01887)
Pfam (PF07654)
Mus musculus (Mouse)
3C
(L)
Antibody 1B1 Light chainpolymer21924346.21UniProt (A0A0G2JZW1)
Pfam (PF07686)
Rattus norvegicus (Rat)
4D
(H)
Antibody 1B1 Heavy chainpolymer23425529.51Rattus norvegicus (Rat)
5E, F, J, K
(A, L)
SODIUM IONnon-polymer23.04Chemie (NA)
6G, H, I
(A)
UNKNOWN LIGANDnon-polymer103.13Chemie (UNL)
7L, M, N, O
(A, B, L, H)
waterwater18.0140Chemie (HOH)
Sequence modifications
A: 1 - 279 (UniProt: A0A0R4J090)
PDBExternal DatabaseDetails
Ser 12Cys 30engineered mutation
His 280-expression tag
His 281-expression tag
His 282-expression tag
His 283-expression tag
His 284-expression tag
His 285-expression tag
L: 1 - 111 (PDB: 6OOR)
L: 112 - 219 (UniProt: A0A0G2JZW1)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight94152.7
Non-Polymers*Number of molecules7
Total formula weight401.3
All*Total formula weight94554.0
*Water molecules are not included.

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PDB entries from 2025-06-18

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