6OJB
Crystal Structure of Aspergillus fumigatus Ega3 complex with galactosamine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Endo alpha-1,4 polygalactosaminidase | polymer | 294 | 32224.4 | 1 | UniProt (Q4WX16) Pfam (PF03537) | Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) | Ega3 |
| 2 | B (B) | alpha-D-mannopyranose-(1-2)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1397.2 | 1 | In PDB GlyTouCan (G91144YH) | |||
| 3 | C (C) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1235.1 | 1 | In PDB GlyTouCan (G28756TJ) | |||
| 4 | D (D) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 5 | E, F (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 6 | G (A) | 2-amino-2-deoxy-alpha-D-galactopyranose | non-polymer | 179.2 | 1 | Chemie (X6X) PubChem (16757688) PubChem (18334297) PubChem (21353469) PubChem (24212046) PubChem (24802162) PubChem (24838689) PubChem (26966777) PubChem (29921421) PubChem (36688078) PubChem (38989254) PubChem (40550316) PubChem (40968860) PubChem (40968864) PubChem (44119524) PubChem (45052094) PubChem (45357295) PubChem (45357373) PubChem (68110533) PubChem (45933887) PubChem (45934315) PubChem (121837) PubChem (51340635) PubChem (9855635) PubChem (2736715) PubChem (57131935) PubChem (12302991) PubChem (12191091) PubChem (57616989) PubChem (57710147) PubChem (58456000) PubChem (58481247) PubChem (58481276) PubChem (58719458) PubChem (58753596) PubChem (58803849) PubChem (58860462) PubChem (59064620) PubChem (59080399) PubChem (59879310) PubChem (59928056) PubChem (60128133) PubChem (66524125) PubChem (66809982) PubChem (67457513) PubChem (67951064) PubChem (68011877) PubChem (71299534) PubChem (71695530) PubChem (75357254) PubChem (89250006) PubChem (89290576) PubChem (89380063) PubChem (89575199) PubChem (89748616) PubChem (89958210) PubChem (90062905) PubChem (91331628) PubChem (91864695) PubChem (117836834) PubChem (118072301) PubChem (739) PubChem (18897) PubChem (24154) PubChem (439213) PubChem (440049) PubChem (441477) PubChem (445621) PubChem (449462) PubChem (1149665) PubChem (1403480) PubChem (1549086) PubChem (5317448) PubChem (5702841) PubChem (5748585) PubChem (6551011) PubChem (6560219) PubChem (6602094) PubChem (6915732) PubChem (125291508) PubChem (125291509) PubChem (6999456) PubChem (7009189) PubChem (7048679) PubChem (7048681) PubChem (7048683) PubChem (7568490) PubChem (7568493) PubChem (7568496) PubChem (9834117) PubChem (9920527) PubChem (9920528) PubChem (11746017) PubChem (129933791) PubChem (130122327) PubChem (12073160) PubChem (12302990) PubChem (12302993) PubChem (12302999) PubChem (12303003) PubChem (131990624) PubChem (132770016) PubChem (133674949) PubChem (134694244) PubChem (139385787) PubChem (140537187) PubChem (140742747) PubChem (140845353) PubChem (145675003) PubChem (145675029) PubChem (145675030) PubChem (148544862) PubChem (151124493) PubChem (154950335) PubChem (163786338) PubChem (167019964) PubChem (168366035) PubChem (168367820) PubChem (168369516) PubChem (168374444) PubChem (168375872) PubChem (172334144) | |||
| 7 | H (A) | water | water | 18.0 | 169 | Chemie (HOH) |
Sequence modifications
A: 46 - 318 (UniProt: Q4WX16)
| PDB | External Database | Details |
|---|---|---|
| Met 25 | - | initiating methionine |
| Gly 26 | - | expression tag |
| Ser 27 | - | expression tag |
| Ser 28 | - | expression tag |
| His 29 | - | expression tag |
| His 30 | - | expression tag |
| His 31 | - | expression tag |
| His 32 | - | expression tag |
| His 33 | - | expression tag |
| His 34 | - | expression tag |
| Ser 35 | - | expression tag |
| Ser 36 | - | expression tag |
| Gly 37 | - | expression tag |
| Leu 38 | - | expression tag |
| Val 39 | - | expression tag |
| Pro 40 | - | expression tag |
| Arg 41 | - | expression tag |
| Gly 42 | - | expression tag |
| Ser 43 | - | expression tag |
| Leu 44 | - | expression tag |
| Met 45 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 32224.4 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 3056.8 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 621.6 | |
| All* | Total formula weight | 35902.7 |
